Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508045 |
| gene name | LOC106581475 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 40967894 ~ 40977862 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| extracellular calcium-sensing receptor-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036965614.1 | False | 3813 | mRNA | 0.51 | 8 | 40967894 | 40977862 |
| TU2381880 | False | 233 | lncRNA | 0.54 | 2 | 40974134 | 40974639 |
| TU2381883 | True | 315 | TUCP | 0.57 | 2 | 40974709 | 40975207 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508046 | LOC106581475 | coding | downstream | 4778 | 40955843 ~ 40963116 (-) |
| LOC118944770 | LOC106581475 | coding | downstream | 15173 | 40944328 ~ 40952721 (-) |
| LOC110507275 | LOC106581486 | coding | downstream | 34294 | 40928387 ~ 40933600 (-) |
| LOC110507274 | LOC106581485 | coding | downstream | 54253 | 40908362 ~ 40913641 (-) |
| LOC110507273 | LOC106581487 | coding | downstream | 84435 | 40878111 ~ 40883459 (-) |
| LOC110507227 | LOC106581475 | coding | upstream | 4928 | 40982790 ~ 40990771 (-) |
| LOC110507228 | LOC106581473 | coding | upstream | 30577 | 41008439 ~ 41012482 (-) |
| LOC110508047 | LOC106581470 | coding | upstream | 54057 | 41031919 ~ 41035966 (-) |
| LOC110507276 | LOC106581470 | coding | upstream | 81504 | 41059366 ~ 41063526 (-) |
| LOC110507277 | LOC106581470 | coding | upstream | 90645 | 41068507 ~ 41073610 (-) |
| G2082938 | NA | non-coding | downstream | 89944 | 40846265 ~ 40877950 (-) |
| G2082944 | NA | non-coding | downstream | 100471 | 40860084 ~ 40867423 (-) |
| G2082885 | NA | non-coding | downstream | 126866 | 40840572 ~ 40841028 (-) |
| G2082884 | NA | non-coding | downstream | 127361 | 40840187 ~ 40840533 (-) |
| G2082850 | LOC106581453 | non-coding | downstream | 199787 | 40765276 ~ 40768107 (-) |
| G2083118 | NA | non-coding | upstream | 67797 | 41045659 ~ 41045898 (-) |
| G2083126 | NA | non-coding | upstream | 80770 | 41058632 ~ 41115832 (-) |
| G2083178 | NA | non-coding | upstream | 176156 | 41154018 ~ 41154490 (-) |
| G2083189 | NA | non-coding | upstream | 192278 | 41170140 ~ 41170468 (-) |
| G2083218 | NA | non-coding | upstream | 221124 | 41198986 ~ 41199304 (-) |
| LOC110508038 | LOC106581456 | other | downstream | 346200 | 40620620 ~ 40654523 (-) |
| lekr1 | LOC106581448 | other | downstream | 780329 | 39984103 ~ 40190414 (-) |
| G2082006 | NA | other | downstream | 1294441 | 39672732 ~ 39681547 (-) |
| G2081616 | NA | other | downstream | 1534196 | 39433278 ~ 39433698 (-) |
| G2083443 | NA | other | upstream | 445677 | 41423539 ~ 41424040 (-) |
| LOC118944786 | LOC106581464 | other | upstream | 698389 | 41573411 ~ 41680789 (-) |
| G2084740 | LOC106613316 | other | upstream | 1806765 | 42784627 ~ 42785035 (-) |
| G2085726 | NA | other | upstream | 2934298 | 43912160 ~ 43912680 (-) |
| G2086783 | NA | other | upstream | 3943047 | 44920909 ~ 44921312 (-) |
| LOC110508045 | LOC106581475 | other | upstream | 70 | 40967894 ~ 40977862 (-) |
