Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944786 |
| gene name | LOC106581464 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 41573411 ~ 41680789 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC109882121, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036965863.1 | False | 5870 | mRNA | 0.50 | 15 | 41573411 | 41680787 |
| XR_005040101.1 | False | 5789 | mRNA | 0.50 | 16 | 41573411 | 41680787 |
| XR_005040102.1 | False | 5787 | mRNA | 0.50 | 16 | 41573411 | 41680787 |
| XR_005040103.1 | False | 5706 | mRNA | 0.50 | 16 | 41573411 | 41680787 |
| XM_036965864.1 | False | 5869 | mRNA | 0.50 | 15 | 41573411 | 41680789 |
| TU2382641 | False | 939 | TUCP | 0.53 | 2 | 41676251 | 41680534 |
| TU2382642 | False | 1045 | TUCP | 0.53 | 2 | 41676251 | 41680640 |
| TU2382643 | True | 1097 | TUCP | 0.52 | 2 | 41676251 | 41680692 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508054 | LOC106613305 | coding | downstream | 160119 | 41362562 ~ 41413292 (-) |
| LOC110507281 | LOC106581467 | coding | downstream | 259701 | 41309176 ~ 41313710 (-) |
| LOC110507280 | LOC106581477 | coding | downstream | 285982 | 41282753 ~ 41287429 (-) |
| LOC110507279 | LOC106581477 | coding | downstream | 299120 | 41267775 ~ 41274291 (-) |
| LOC110508053 | LOC106581466 | coding | downstream | 325589 | 41242573 ~ 41247822 (-) |
| LOC110508065 | LOC106581500 | coding | upstream | 125919 | 41806708 ~ 41809013 (-) |
| LOC110508063 | LOC106581498 | coding | upstream | 246128 | 41926917 ~ 42107164 (-) |
| aadac | LOC106613299 | coding | upstream | 581241 | 42262030 ~ 42285545 (-) |
| neu4 | LOC106581489 | coding | upstream | 835738 | 42516527 ~ 42540340 (-) |
| LOC110508058 | LOC106581494 | coding | upstream | 880781 | 42561570 ~ 42564580 (-) |
| G2083664 | NA | non-coding | downstream | 11269 | 41561356 ~ 41562142 (-) |
| G2083654 | NA | non-coding | downstream | 24796 | 41545346 ~ 41548615 (-) |
| G2083638 | dhx36 | non-coding | downstream | 35292 | 41537730 ~ 41538119 (-) |
| G2083635 | NA | non-coding | downstream | 53900 | 41519258 ~ 41519511 (-) |
| G2083631 | NA | non-coding | downstream | 59399 | 41513727 ~ 41514012 (-) |
| G2083706 | NA | non-coding | upstream | 19634 | 41700423 ~ 41709292 (-) |
| G2083739 | NA | non-coding | upstream | 65431 | 41746220 ~ 41746491 (-) |
| G2083740 | NA | non-coding | upstream | 67013 | 41747802 ~ 41748242 (-) |
| G2083745 | NA | non-coding | upstream | 70745 | 41751534 ~ 41751816 (-) |
| G2083746 | NA | non-coding | upstream | 71620 | 41752409 ~ 41752789 (-) |
| G2083443 | NA | other | downstream | 149371 | 41423539 ~ 41424040 (-) |
| LOC110508045 | LOC106581475 | other | downstream | 598204 | 40967894 ~ 40977862 (-) |
| LOC110507273 | LOC106581487 | other | downstream | 692174 | 40878111 ~ 40883459 (-) |
| LOC110508038 | LOC106581456 | other | downstream | 951717 | 40620620 ~ 40654523 (-) |
| lekr1 | LOC106581448 | other | downstream | 1385846 | 39984103 ~ 40190414 (-) |
| G2084740 | LOC106613316 | other | upstream | 1103838 | 42784627 ~ 42785035 (-) |
| G2085726 | NA | other | upstream | 2231371 | 43912160 ~ 43912680 (-) |
| G2086783 | NA | other | upstream | 3240120 | 44920909 ~ 44921312 (-) |
| G2087090 | LOC106593344 | other | upstream | 3849567 | 45530356 ~ 45530780 (-) |
| G2087288 | NA | other | upstream | 4116281 | 45797070 ~ 45798330 (-) |
| G2083698 | NA | non-coding | downstream | 14599 | 41661309 ~ 41661652 (-) |
| G2083696 | NA | non-coding | downstream | 26104 | 41648900 ~ 41650147 (-) |
| G2083694 | NA | non-coding | downstream | 29677 | 41645430 ~ 41646574 (-) |
| G2083686 | NA | non-coding | downstream | 65147 | 41603398 ~ 41611104 (-) |
| G2083688 | NA | non-coding | downstream | 70922 | 41603936 ~ 41605329 (-) |
