LOC110515379


Basic Information

Item Value
gene id LOC110515379
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46362662 ~ 46365128 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021594296.2
TGTCAATTGACTATGTGGCTGTGGTAGGTAGTGACAACCATTCTGCTGTGCTTCGGTGCCTGTTTATGGTATGACCTAAATAAGGCGTGtccctgtcaaaatgtaatgcgATTTCAAGCTTTAGCCTCTAGATGGCGGTAAATGTACAGTTATTAAACCAGAGATTACTGGTAGGCCAGTTATATAAAACAAGTGTTAGGTGGAGCTGTAGGTAATAAGAAAGAGGCTCGGTGGAAAATTAAACCTGTGACCAGCTAGCTGACATCTAATACACGGACCACTGACAGGGCTTTGCAGAAAATGAACCCTTATGTCGGCAACATTGTCTTTTGACTCCCTTTGTCTTGAGACATATATGAACTTACTTCACATTGTTAAGAGGAACTTGGTCATAGTGTGATGTAATGTCCATTCCATCAACTTCCTGTTTCGTGTTACTAAATAAGCAGTGAAGAAAGGGTGTGATGTTGAGTTTGGGTCCTCACAGACTTGATTGGAAACGAACCAAGTTGGAACATTATGGAGAGCGTCATTGAGGGTTCATCTGTGGATCAAGATCCTACAAATGGGTATGAAAATGTGACAGCCAACCAGCAGGACAACAGAGACGGCTCAGGATTAGCTCAGCACTCAAGCAGAAGAGTCTACAGATTAATTGCTGTGGGTTTTGGGTCGCTGTGTGTCCTACAAGTCCTTCTTAACGTCTCCCTGCGTTTAGTCGACAACCTGAGCGAAGCGAGAGTCCAGTTGGCCTGTGAGAAAGACGTCCGCAAGATATGTCCCCAAGACTGGATAATACAGTCCGGCTGCAGTTGTTACTTCATCTCCCTTGACACTAAAAACTGGACTGAGAGTAGACAGGACTGTCTGGACAGAGGAGCAGACCTAGTGATCATAAACAGCAGAGTGGAACAAGTTTTCATCAAAACATTGGGTCACAGATCCTGGATCGGTCTGACTGACAGAGAAGTTGAGGGAACCTGGAGATGGTTGGACGGGACACCACTGACCGCAAGTTACTGGACTACAACCGGCGAACCGAATGGAGGAGCTGAAGAGAACTGTGCTGAGATTATCGGCATTCACAATGACCCGGTTTTGGCCTGGAATGATCTACCATGTTACTATGAACAGCGTTGGATCTGTGAGAGGTCGTTGGTTCTGTGAGAGGTTGTTGGATCTGTGAGAGGTCATTAGTTCTGTGATAGGCCATTGGATCTGTGAGAGGTCGTTGGATCTGTGAGAGGTCGTTGGTTCTGTGAGAGTTTGTTGGATCTGTGAGAGTTTGTTGGATCTGTGATAGGCCGTTGGATCTGTGAGAGGTCGTTGGTTCTGTGAGATTCAGCCCTAACATGTCCCTAACACCTACAATAGTATCCACGTCCATTCCAGAACCCACCAAACAACATTATTTTAAGCAAGTAAGGCAAGTCACAATTAATTTAGGGAAAAAGCAGGTTCCGCATTTATAAAAGTAAcgtttttttcctctctcttttgACTCCCTTCTCACAGGTTCtggcattgtccccccccccccccccccatgctcaTGTAACACGTGTTGAATTCCTTTGTTGTATAATGATCCAGAGTCTGAATAGTTCCATGAAAATCCTAATCaatcctatatgttaaaacaCTTGTAAGAATTGTATATGGTCACGGATAGTGTTTTATAATGGTCTCCCAACATTATATTGTAATATGTATGCATTTCAGTCATTTATGAACTTATCTGTTGATTTGtgaacactgtactgtacattttactcaggggcacaactttcactggggacatgggggggacatgtcccccccccAACCCAGTTTTAATCACTGGGATGTGATTcaaaacgaggcaacggtgtgctttaggaccatgcagacgcCTCCGAGCGGTCTGATAGGCTGTTTCGAGTGTTTATCCAactgaataaaacattttttttttttttattattaaaaaaaaaagttatgcccctcccacttctaaaaccaaagttgcgcccctgattTTACTACACTTCGTCATTGGGCTAGCATGGCTATTCATGCCCCcttttcgttgttcatttgtacTTTACAGAGGATGTGGTGCATTAGGGCAGCACAACATTTGTTTTTGGAAGTTGTTATTGTAATTATCAGCTGTGTCATGTGTTTTTGTTAGGATATTTTGACAATATTTTACTGTTCTCAAGAGCACatcatgtactgtaatgtacttaaCACCTGGCTGTAATAAAGAACCTTGTCTGGCTGACGCCTACAGGCTACTGGATATTTACATTTAAAACTGTACAATTCATTTGTAATTACATTTTTATGTGAAACAACATTATTGTTATTGGCCCCTGTCTACATTCACCTCTTTGGCTCGTTTACATTCACTAGTGAATGACTCCTCTCGGTTGATGTATGGGATGTGTAGCTCTGGAGTGTAGAGAACAAGTTGTACTGATGT

Function

NR:

description
C-type lectin domain family 4 member M-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021594296.2 True 2467 mRNA 0.43 1 46362662 46365128

Neighbor

gene id symbol gene type direction distance location
cog6 cog6 coding downstream 165433 46012193 ~ 46197229 (-)
slc25a15a LOC106581545 coding downstream 661078 45687954 ~ 45701584 (-)
stoml3a LOC104925222 coding downstream 676549 45673501 ~ 45686113 (-)
rwdd2b rwdd2b coding downstream 919889 45435721 ~ 45442773 (-)
gbe1b gbe1 coding downstream 1641020 44362319 ~ 44721642 (-)
lpar6a LOC106592078 coding upstream 130424 46409330 ~ 46497886 (-)
rcbtb2 rcbtb2 coding upstream 171073 46536201 ~ 46571673 (-)
LOC118944689 NA coding upstream 403520 46768648 ~ 46770702 (-)
ndufc2 nduc2 coding upstream 607453 46972581 ~ 46975116 (-)
LOC118944730 NA coding upstream 661031 47026159 ~ 47026384 (-)
G2088057 NA non-coding downstream 106 46361765 ~ 46362556 (-)
G2088031 NA non-coding downstream 8052 46352598 ~ 46354610 (-)
G2088052 NA non-coding downstream 15670 46344159 ~ 46346992 (-)
G2088050 NA non-coding downstream 24839 46337560 ~ 46337823 (-)
G2088043 NA non-coding downstream 38822 46323274 ~ 46323840 (-)
G2088067 NA non-coding upstream 14758 46379886 ~ 46380744 (-)
G2088069 NA non-coding upstream 18242 46383370 ~ 46445526 (-)
G2088085 NA non-coding upstream 50887 46416015 ~ 46416970 (-)
G2088105 NA non-coding upstream 92569 46457697 ~ 46461384 (-)
G2087288 NA other downstream 564332 45797070 ~ 45798330 (-)
G2087090 LOC106593344 other downstream 831882 45530356 ~ 45530780 (-)
G2086783 NA other downstream 1441350 44920909 ~ 44921312 (-)
G2085726 NA other downstream 2449982 43912160 ~ 43912680 (-)
G2084740 LOC106613316 other downstream 3577627 42784627 ~ 42785035 (-)
G2088345 NA other upstream 638737 47003865 ~ 47004875 (-)
G2088531 NA other upstream 887547 47252675 ~ 47253186 (-)
G2088739 NA other upstream 1179175 47544303 ~ 47550500 (-)
G2089393 NA other upstream 1428468 47793596 ~ 47794379 (-)

Expression


Co-expression Network