LOC110515838


Basic Information

Item Value
gene id LOC110515838
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47608558 ~ 47609889 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110515838
atgcagtgccttagaccgctgcgacactCGGAGATTCCCCCGCCACCAAGTGATAACAGTAATAATAGTGATAATACTGACACTAGTGATAACTGTGATACCGTGATAATAGTGATATTATCACTAATAACATTGGTAACAGCGATAATAGTGACAAGTGATAATAGTGATAACAGGGATAACAGTGATAACAGGGATAACAGGGATAACAGGGATCGCAGTAATACCAGTGACAGTAGTGATAACAGTGACAACAGTGATAACAGAGATAAGTGACAATTGTGATAATAGTGATAATGATGCTACTGGTGATAACATTgataatagttatagtagtgaTAACAGTGACAATAGTGATAACAATGACAATAGTGATACCAGTTATAACATTGCTAATAGTGATAATGGTGATAGTAGTGATAATAGTGATAACGGTGAAAATGGTGATAATGGTGATAAGGGTGACAACAGTGATAGCGGTGCTAATAGTGATAACAGTGATAATAGTGATAATGGTGATAACAGTGATAATGGTGATAGTAGTGATAACGGTGATAACAGTGATAACGGTGATAACAGTGCCAATGGTGATAGTAGTGATAACGGCGATAACGGTGATAACGATGATAATGGCGATAGTAGTGATACCAGCGataatggtgatggtagtgataccAGCGATAATGGTGATAGTAGTGATAACAGTGAGGGTGGTGATAACAGTGATAACGGTGATAGTAGTGATAACAGTGATAACGGTGAAAACAGTGATAATGGTGATAGTAGCGATAACAGTGAGGGTGGTGATAACAGTGATAACGGTGATAGTAGTGATAACAGTGATAATGGTGATAACAGTGATAATGGTGATAGTAGCGATAACGGTGATAACAGTGATAACAGTGATAACGACGATAACAGTGATAACGGCGATAACAGTGATAACGGCGATAACAGTGATAACGGTGATAACAGTGATTACAGTGACACCGGTGACAACAGTGATAACAGTGATAACAGCGATAACAGTGATAATAGTGATAACGGTGATAACAGCGAGAACAGTGATACCAGCGATAACGGCAATAACGACGATAACAGTGATAACAGTGATAACAGTGATAGTGGTGATAATATCGATAGTGATAACAGTGACAATAGTGAGAACGGTGATGGTAGTGATAATAGTGATAACAGTGATAGTAGTGATAACAGTGATAGTAGCGATAATAGCGGTAGTGATAATAGTGACAATAGAGGGGGCTGTAAGAAGCTACAGGCCTATGGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110515838 True 1291 mRNA 0.39 2 47608558 47609889

Neighbor

gene id symbol gene type direction distance location
LOC118944730 NA coding downstream 582174 47026159 ~ 47026384 (-)
ndufc2 nduc2 coding downstream 633442 46972581 ~ 46975116 (-)
LOC118944689 NA coding downstream 837856 46768648 ~ 46770702 (-)
rcbtb2 rcbtb2 coding downstream 1036885 46536201 ~ 46571673 (-)
lpar6a LOC106592078 coding downstream 1110672 46409330 ~ 46497886 (-)
LOC118944731 NA coding upstream 1174905 48784794 ~ 48792946 (-)
yap1 yap1 coding upstream 1183268 48793157 ~ 48897016 (-)
cep126 NA coding upstream 1304562 48914451 ~ 49064609 (-)
LOC110515989 arhgap42 coding upstream 1673126 49281401 ~ 49507522 (-)
LOC118944691 NA coding upstream 2011698 49621587 ~ 49639819 (-)
G2089296 NA non-coding downstream 10600 47597384 ~ 47597958 (-)
G2088738 NA non-coding downstream 59502 47530928 ~ 47549056 (-)
G2088719 NA non-coding downstream 115737 47488902 ~ 47492821 (-)
G2088718 NA non-coding downstream 120760 47486617 ~ 47487798 (-)
G2088708 NA non-coding downstream 146381 47461947 ~ 47462177 (-)
G2089347 NA non-coding upstream 86830 47696719 ~ 47698969 (-)
G2089355 NA non-coding upstream 113630 47723519 ~ 47783670 (-)
G2089393 NA non-coding upstream 183707 47793596 ~ 47794379 (-)
G2089397 NA non-coding upstream 192177 47802066 ~ 47802701 (-)
G2089402 NA non-coding upstream 196078 47805967 ~ 47807365 (-)
G2088739 NA other downstream 58058 47544303 ~ 47550500 (-)
G2088531 NA other downstream 355372 47252675 ~ 47253186 (-)
G2088345 NA other downstream 603683 47003865 ~ 47004875 (-)
G2087288 NA other downstream 1810228 45797070 ~ 45798330 (-)
G2089738 LOC106591115 other upstream 1162460 48772349 ~ 48774632 (-)
G2090320 NA other upstream 1750071 49359960 ~ 49361515 (-)
LOC110519322 cntn5 other upstream 2146691 49656156 ~ 50216555 (-)
G2090959 NA other upstream 2500230 50110119 ~ 50110870 (-)

Expression


Co-expression Network