G2038518


Basic Information

Item Value
gene id G2038518
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 121350 ~ 121635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2332128
cctctcatcatgaatttatccaagtcttttcaactcacaacagcacagacccaacttttggagagggggggttgtctttcatttcactctacactccaaatgtcatatatgtatataatcacttgcacatttagcaaaaaacactacattggggaaacccagtatacaatagaaaatagacttaaactgcattctatacaatatcaaacgggcccatttacacacagaactagtgactcatttccaggatcaccccatcacttacctcaatatatcaggattacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2332128 True 286 lncRNA 0.38 1 121350 121635

Neighbor

gene id symbol gene type direction distance location
LOC110507289 LOC106612414 coding downstream 209536 331171 ~ 377043 (+)
LOC110507292 LOC106580667 coding downstream 255402 377037 ~ 426656 (+)
defbl3 NA coding downstream 626266 747901 ~ 749047 (+)
LOC110507300 NA coding downstream 695686 817321 ~ 831714 (+)
rhbdd1 rhbdd1 coding downstream 710063 831698 ~ 861394 (+)
G2038517 NA non-coding upstream 1464 119118 ~ 119886 (+)
G2038506 NA non-coding upstream 44620 76443 ~ 76730 (+)
G2038502 NA non-coding upstream 76187 44788 ~ 45163 (+)
G2038521 NA non-coding downstream 45675 167310 ~ 207844 (+)
G2038535 NA non-coding downstream 93805 215440 ~ 219388 (+)
G2038664 NA non-coding downstream 280890 402525 ~ 455929 (+)
G2038715 NA non-coding downstream 363770 485405 ~ 485617 (+)
G2038722 NA non-coding downstream 378773 500408 ~ 500885 (+)
G2040080 NA other downstream 1321042 1442677 ~ 1498565 (+)
G2040180 atg16l1 other downstream 1531205 1652840 ~ 1655336 (+)
G2040773 LOC106580643 other downstream 2412259 2533894 ~ 2542349 (+)
rpl35a LOC106612432 other downstream 2548754 2670319 ~ 2685738 (+)

Expression


Co-expression Network