G2038722


Basic Information

Item Value
gene id G2038722
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 500408 ~ 500885 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2332357
tgtttgcctgtgtttctgtcctggagtgtgtttccggtgtcctggaacgcaccctgtctggttgccgggcgaattagcttgttgggagatcgatgttcacccgcacctgtatcccatcagtaatctgcacacctgtcctgatcatcatctctccccttcaaaagctctgacctgacatccattccctgccggatcgttagccatgaacattactcacccggatcatttaccccattcccgcctgaacgtcagaggattccgcttccccattggatccacctatttactcccatctactcaccaccgctacccgctacaccacctggatatatctacccattcacattcacttgtaaataaatactcaccttcttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2332357 True 376 lncRNA 0.51 2 500408 500885

Neighbor

gene id symbol gene type direction distance location
LOC110507292 LOC106580667 coding upstream 73752 377037 ~ 426656 (+)
LOC110507289 LOC106612414 coding upstream 123365 331171 ~ 377043 (+)
defbl3 NA coding downstream 247016 747901 ~ 749047 (+)
LOC110507300 NA coding downstream 316436 817321 ~ 831714 (+)
rhbdd1 rhbdd1 coding downstream 330813 831698 ~ 861394 (+)
LOC110507304 NA coding downstream 520210 1021095 ~ 1042506 (+)
LOC110507305 LOC106579784 coding downstream 574293 1075178 ~ 1091699 (+)
G2038715 NA non-coding upstream 14791 485405 ~ 485617 (+)
G2038664 NA non-coding upstream 44479 402525 ~ 455929 (+)
G2038535 NA non-coding upstream 281020 215440 ~ 219388 (+)
G2038521 NA non-coding upstream 292564 167310 ~ 207844 (+)
G2038518 NA non-coding upstream 378773 121350 ~ 121635 (+)
G2039149 NA non-coding downstream 276998 777883 ~ 778097 (+)
G2039188 NA non-coding downstream 347402 848287 ~ 848502 (+)
G2039786 NA non-coding downstream 774074 1274959 ~ 1275187 (+)
G2040080 NA other downstream 941792 1442677 ~ 1498565 (+)
G2040180 atg16l1 other downstream 1151955 1652840 ~ 1655336 (+)
G2040773 LOC106580643 other downstream 2033009 2533894 ~ 2542349 (+)
rpl35a LOC106612432 other downstream 2169504 2670319 ~ 2685738 (+)

Expression


Co-expression Network