G2039921


Basic Information

Item Value
gene id G2039921
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 1308191 ~ 1308416 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2333713
atgttttttttaacctcttttcactttgtcattatagggtattgtgtgtagattgatgaggggaaaaaatattgaatccattttagaataaggctgtaatgtaacaaaatgtggaaaaagggaagggttcTTAATACACTGTATATCAAGATTGAGGTTTTCTACTTAAATGTCAGCTAGCTAATGCTTTGATATTGTACATTTTCAGAAGTTGTTGCATACATTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2333713 True 226 lncRNA 0.31 1 1308191 1308416

Neighbor

gene id symbol gene type direction distance location
gmnc gmnc coding upstream 5699 1290585 ~ 1302492 (+)
LOC110507306 LOC106579799 coding upstream 184037 1122000 ~ 1124154 (+)
LOC110507305 LOC106579784 coding upstream 216492 1075178 ~ 1091699 (+)
LOC110507304 NA coding upstream 265685 1021095 ~ 1042506 (+)
rhbdd1 rhbdd1 coding upstream 446797 831698 ~ 861394 (+)
LOC110507313 LOC106579790 coding downstream 272264 1580680 ~ 1601430 (+)
LOC110507041 LOC106612348 coding downstream 293700 1602116 ~ 1608092 (+)
atg16l1 atg16l1 coding downstream 316787 1625203 ~ 1677253 (+)
LOC118944795 NA coding downstream 345304 1653720 ~ 1653989 (+)
LOC118944796 NA coding downstream 346583 1654999 ~ 1655266 (+)
G2039784 NA non-coding upstream 4888 1302898 ~ 1303303 (+)
G2039791 NA non-coding upstream 27795 1280143 ~ 1280396 (+)
G2039790 NA non-coding upstream 29392 1278587 ~ 1278799 (+)
G2039786 NA non-coding upstream 33004 1274959 ~ 1275187 (+)
G2039188 NA non-coding upstream 459689 848287 ~ 848502 (+)
G2039930 NA non-coding downstream 7824 1316240 ~ 1323039 (+)
G2039942 NA non-coding downstream 24316 1332732 ~ 1332988 (+)
G2039948 NA non-coding downstream 26772 1335188 ~ 1335615 (+)
G2040054 NA non-coding downstream 99737 1408153 ~ 1409611 (+)
G2040075 NA non-coding downstream 126808 1435224 ~ 1438752 (+)
LOC110507300 NA other upstream 489723 817321 ~ 831714 (+)
G2040080 NA other downstream 134261 1442677 ~ 1498565 (+)
G2040180 atg16l1 other downstream 344424 1652840 ~ 1655336 (+)
G2040773 LOC106580643 other downstream 1225478 2533894 ~ 2542349 (+)
rpl35a LOC106612432 other downstream 1361973 2670319 ~ 2685738 (+)
G2040863 NA other downstream 1491365 2799781 ~ 2802001 (+)

Expression


Co-expression Network