G2039942


Basic Information

Item Value
gene id G2039942
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 1332732 ~ 1332988 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2333738
gcttgggggtgatttacacggctgtgactataatcaaagagaattttCTTGGAAGacaatgcggtcggcatttgattgtaaggaattctaggtcaggtgaacaaaaggacttgagttcctgtatgttgttgtgattacaccatgagtcgttaatcataaggcatacaccccgcccttcttcttatcAGAGAGATGTTTGAGAGatatttgtttctgtcggcgcgatgggtgaagaaaccgggtgactgtaccgactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2333738 True 257 lncRNA 0.44 1 1332732 1332988

Neighbor

gene id symbol gene type direction distance location
gmnc gmnc coding upstream 30240 1290585 ~ 1302492 (+)
LOC110507306 LOC106579799 coding upstream 208578 1122000 ~ 1124154 (+)
LOC110507305 LOC106579784 coding upstream 241033 1075178 ~ 1091699 (+)
LOC110507304 NA coding upstream 290226 1021095 ~ 1042506 (+)
rhbdd1 rhbdd1 coding upstream 471338 831698 ~ 861394 (+)
LOC110507313 LOC106579790 coding downstream 247692 1580680 ~ 1601430 (+)
LOC110507041 LOC106612348 coding downstream 269128 1602116 ~ 1608092 (+)
atg16l1 atg16l1 coding downstream 292215 1625203 ~ 1677253 (+)
LOC118944795 NA coding downstream 320732 1653720 ~ 1653989 (+)
LOC118944796 NA coding downstream 322011 1654999 ~ 1655266 (+)
G2039930 NA non-coding upstream 9693 1316240 ~ 1323039 (+)
G2039921 NA non-coding upstream 24316 1308191 ~ 1308416 (+)
G2039784 NA non-coding upstream 29429 1302898 ~ 1303303 (+)
G2039791 NA non-coding upstream 52336 1280143 ~ 1280396 (+)
G2039790 NA non-coding upstream 53933 1278587 ~ 1278799 (+)
G2039948 NA non-coding downstream 2200 1335188 ~ 1335615 (+)
G2040054 NA non-coding downstream 75165 1408153 ~ 1409611 (+)
G2040075 NA non-coding downstream 102236 1435224 ~ 1438752 (+)
G2040158 NA non-coding downstream 204985 1537973 ~ 1539172 (+)
G2040157 NA non-coding downstream 221617 1554605 ~ 1556521 (+)
LOC110507300 NA other upstream 514264 817321 ~ 831714 (+)
G2040080 NA other downstream 109689 1442677 ~ 1498565 (+)
G2040180 atg16l1 other downstream 319852 1652840 ~ 1655336 (+)
G2040773 LOC106580643 other downstream 1200906 2533894 ~ 2542349 (+)
rpl35a LOC106612432 other downstream 1337401 2670319 ~ 2685738 (+)
G2040863 NA other downstream 1466793 2799781 ~ 2802001 (+)

Expression


Co-expression Network