G2040080


Basic Information

Item Value
gene id G2040080
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 1442677 ~ 1498565 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2333878
catgtccaggcccgtctgaagtttgctagagagcatttggatgatccagaagaagattgggagaatgtcatatggtcagatgaaaccaaaatataactcaactcgtcgtgtttggaggacaaagaatgctgagttgcatccaaagaacaccaaacctactgtgaagcatgagagtggaaacatcatgctttggggctgtttttatgcaaagggaccaggacgactgatccgtgtaaaggaaagaatgaatggggccatgtatcgtgagattgagtgaaaacctccttccatcagcaagggcattgaagatgaaacgtggctgggtctttcagcatgacaatgatcccaaacacaccgcccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcccagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtctgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctacatggaggaatgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacgtttgacctctgtcattgccaacaaagggtaaataacaaagtattgagataaacttttgttattgaccaaatacttattttccaccataatttgcaaataaattcataaaaaatcctacaatgtgattatctggatttttttccctcattttctctgtcatagttgaagtgtacctatgatgaaaattacaggcctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtgtcttttttgttgtgtttttttgtttccaAACCTTTTCCTTGGTATCAACATTTTTTAAAGGTGGGAACGGGGAAGGAACTTGAGTggagttattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2333878 True 940 TUCP 0.42 2 1442677 1498565

Neighbor

gene id symbol gene type direction distance location
gmnc gmnc coding upstream 140185 1290585 ~ 1302492 (+)
LOC110507306 LOC106579799 coding upstream 318523 1122000 ~ 1124154 (+)
LOC110507305 LOC106579784 coding upstream 350978 1075178 ~ 1091699 (+)
LOC110507304 NA coding upstream 400171 1021095 ~ 1042506 (+)
rhbdd1 rhbdd1 coding upstream 581283 831698 ~ 861394 (+)
LOC110507313 LOC106579790 coding downstream 82115 1580680 ~ 1601430 (+)
LOC110507041 LOC106612348 coding downstream 103551 1602116 ~ 1608092 (+)
atg16l1 atg16l1 coding downstream 126638 1625203 ~ 1677253 (+)
LOC118944795 NA coding downstream 155155 1653720 ~ 1653989 (+)
LOC118944796 NA coding downstream 156434 1654999 ~ 1655266 (+)
G2040075 NA non-coding upstream 3925 1435224 ~ 1438752 (+)
G2040054 NA non-coding upstream 33066 1408153 ~ 1409611 (+)
G2039948 NA non-coding upstream 107062 1335188 ~ 1335615 (+)
G2039942 NA non-coding upstream 109689 1332732 ~ 1332988 (+)
G2039930 NA non-coding upstream 119638 1316240 ~ 1323039 (+)
G2040158 NA non-coding downstream 39408 1537973 ~ 1539172 (+)
G2040157 NA non-coding downstream 56040 1554605 ~ 1556521 (+)
G2040166 NA non-coding downstream 63434 1561999 ~ 1562295 (+)
G2040167 NA non-coding downstream 63948 1562513 ~ 1562805 (+)
G2040168 NA non-coding downstream 64626 1563191 ~ 1563573 (+)
LOC110507300 NA other upstream 624209 817321 ~ 831714 (+)
G2040180 atg16l1 other downstream 154275 1652840 ~ 1655336 (+)
G2040773 LOC106580643 other downstream 1035329 2533894 ~ 2542349 (+)
rpl35a LOC106612432 other downstream 1171824 2670319 ~ 2685738 (+)
G2040863 NA other downstream 1301216 2799781 ~ 2802001 (+)
LOC110507334 LOC106612406 other downstream 1315711 2813649 ~ 2815411 (+)

Expression


Co-expression Network