G2040790


Basic Information

Item Value
gene id G2040790
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2553119 ~ 2643392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2334669
tatgtctctatcagttttgcacatcgagagactgaaatattttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagatctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2334669 True 270 lncRNA 0.41 2 2553119 2643392

Neighbor

gene id symbol gene type direction distance location
LOC110507327 LOC106612439 coding upstream 54775 2495659 ~ 2498344 (+)
LOC110507322 LOC106580637 coding upstream 581077 1965604 ~ 1972042 (+)
LOC118944727 NA coding upstream 647429 1892454 ~ 1905690 (+)
LOC110507316 fa9 coding upstream 704342 1825181 ~ 1848777 (+)
LOC110507042 dgkd coding upstream 738674 1763705 ~ 1814445 (+)
rpl35a LOC106612432 coding downstream 26927 2670319 ~ 2685738 (+)
abcc5 LOC106580650 coding downstream 44612 2688004 ~ 2752049 (+)
rnpepl1 rnpepl1 coding downstream 121011 2764403 ~ 2799047 (+)
LOC110507256 LOC106612406 coding downstream 164891 2808283 ~ 2810261 (+)
LOC110507334 LOC106612406 coding downstream 170257 2813649 ~ 2815411 (+)
G2040774 LOC106580643 non-coding upstream 24149 2528011 ~ 2528970 (+)
G2040768 NA non-coding upstream 32813 2518728 ~ 2520306 (+)
G2040610 NA non-coding upstream 251740 2289651 ~ 2301379 (+)
G2040607 NA non-coding upstream 258332 2286389 ~ 2294787 (+)
G2040608 NA non-coding upstream 259688 2288055 ~ 2293431 (+)
G2040842 NA non-coding downstream 78895 2722287 ~ 2740038 (+)
G2040761 NA non-coding downstream 99550 2742942 ~ 2743297 (+)
G2040865 NA non-coding downstream 159010 2802402 ~ 2802622 (+)
G2040874 NA non-coding downstream 168119 2811511 ~ 2812731 (+)
G2040877 NA non-coding downstream 172450 2815842 ~ 2890204 (+)
G2040773 LOC106580643 other upstream 10770 2533894 ~ 2542349 (+)
G2040180 atg16l1 other upstream 897783 1652840 ~ 1655336 (+)
G2040080 NA other upstream 1054554 1442677 ~ 1498565 (+)
LOC110507300 NA other upstream 1734651 817321 ~ 831714 (+)
G2040863 NA other downstream 156389 2799781 ~ 2802001 (+)
G2040882 NA other downstream 190704 2834096 ~ 2838927 (+)
G2043193 NA other downstream 1762066 4405458 ~ 4406126 (+)

Expression


Co-expression Network