G2040761


Basic Information

Item Value
gene id G2040761
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2742942 ~ 2743297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2334635
GGAACTACTGCTACAGTGAATTTGCTGGAACTCCACGCTAGCACCACTAACAGAGGTGTTTGGAGTGAGGGGGACTACTGCTGCAGTGAACGTGTTGGAACTCTACACTAGCACCATTTTAACAGAGGCGTTTGGGGGTGTTTGGAGTGAGGGGGAACTACTGCTGCAGTGAATGTGTTGGAACTCCACACTAGCACCACTTTAACAGAGGTGTTTGGAGTGAGGGGGAACTCCTGCTGCAGTGAACGTGTTGGAACTCTACACTAGCACCACTTTAACAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2334635 True 284 lncRNA 0.50 2 2742942 2743297

Neighbor

gene id symbol gene type direction distance location
rpl35a LOC106612432 coding upstream 57204 2670319 ~ 2685738 (+)
LOC110507330 LOC106580646 coding upstream 92396 2567766 ~ 2650546 (+)
LOC110507331 NA coding upstream 147317 2585011 ~ 2595625 (+)
LOC110507327 LOC106612439 coding upstream 244598 2495659 ~ 2498344 (+)
LOC110507322 LOC106580637 coding upstream 770900 1965604 ~ 1972042 (+)
rnpepl1 rnpepl1 coding downstream 21106 2764403 ~ 2799047 (+)
LOC110507256 LOC106612406 coding downstream 64986 2808283 ~ 2810261 (+)
LOC110507334 LOC106612406 coding downstream 70352 2813649 ~ 2815411 (+)
LOC118944765 NA coding downstream 107656 2850953 ~ 2854454 (+)
LOC110507335 NA coding downstream 138331 2881628 ~ 2889241 (+)
G2040842 NA non-coding upstream 2904 2722287 ~ 2740038 (+)
G2040790 NA non-coding upstream 99550 2553119 ~ 2643392 (+)
G2040774 LOC106580643 non-coding upstream 213972 2528011 ~ 2528970 (+)
G2040768 NA non-coding upstream 222636 2518728 ~ 2520306 (+)
G2040610 NA non-coding upstream 441563 2289651 ~ 2301379 (+)
G2040865 NA non-coding downstream 59105 2802402 ~ 2802622 (+)
G2040874 NA non-coding downstream 68214 2811511 ~ 2812731 (+)
G2040877 NA non-coding downstream 72545 2815842 ~ 2890204 (+)
G2040899 NA non-coding downstream 105116 2848413 ~ 2848934 (+)
G2040923 NA non-coding downstream 155405 2898702 ~ 2898924 (+)
G2040773 LOC106580643 other upstream 200593 2533894 ~ 2542349 (+)
G2040180 atg16l1 other upstream 1087606 1652840 ~ 1655336 (+)
G2040080 NA other upstream 1244377 1442677 ~ 1498565 (+)
LOC110507300 NA other upstream 1924474 817321 ~ 831714 (+)
G2040863 NA other downstream 56484 2799781 ~ 2802001 (+)
G2040882 NA other downstream 90799 2834096 ~ 2838927 (+)
G2043193 NA other downstream 1662161 4405458 ~ 4406126 (+)
LOC110507374 spa17 other downstream 1942588 4685868 ~ 4692872 (+)

Expression


Co-expression Network