G2040863



Basic Information


Item Value
gene id G2040863
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2799781 ~ 2802001 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2334749
ggcctgattggtggagtgctgcagatatggttgtccttctggaagattctccgatctccacagaggaactctggagctctatcagagtagccattgggttcttggtcacctccctgaccaaggcccttctctcccgattgctcagtttggccgggcagccagctctagaaagactCTTAGTGGTTCccaaattcttccatttaagaaagatggagtccactgtgttcttggagacctttcaatgctgcagacatttgttggtacccatccccagatctgtgcatcgacataatcctgtctctgagctctacggacaattccttcaacttcatggcttggtttttgctctgacatgcactgtcacctgtgggaccttatataaattggtgtgcctttccaatcaattgaatttacaacaggtggactccaagttgtagaaacatctcaaggatgatcaatgtaaacaggatgcacctgagctcaattttgagtctcatagcaaagggtctgaataaggtatttctgttttttggggggtgttTTGCAAAAAAATCCcccattattgtgtgtagattgatgaagcaaacattttatttaatacattttagatttatggctgtaacgtaacaaaatgtggaaaaatcaaggggtctgaatactttctaattGCACTGTATATGCGTATTTATATGTTGAGTCTGATTTTTGTAAGCTAACCGTTTGAAACCTCTCTGGGAAGgacaatgttgtgtgtgtgtgtgtgcgcgcgcgtgcgtgcgtgcgcatgcACTTCATGAATGGAGGAAACCATCTATTGACTGTTTACACACATGTTGTGTGTCCTGCTTAGCGCTGGGATTATGGCTTCATGAGCCTGCAGCTTGTGCCCTAGACTAATTTACAGGGAGAGTGAGCCACCAAATGTCCCTCTGCCCAGTCTGTAGTCTGAGAGAGGAGAGCCCTGCTGTCCCCAAATGGCaatctattccctacatattgcaCTCctcttcGGGGACCCCCAGACATCTCACAAATTTGTTGTGGCCCTGAATTAGCTCACCTGATTGAcatagtcaagggcttgatggtTAGTTGACAAGCTAAGAGTCAGGTGAGCTAGGTGTGGAATAGATCAAATGCATAGAATGGCTGGGGGTCCCTgcggagaggtttgagaaccgcTACCATAGATGgggctatggtcaaaagtagtacactatcgAACCCAGGGCCCATAGCATTTGGGACGCAAGCCTCTGTTTGCTACGTTCAACACTGCACACTTTAACCCTACCTTTAATAATTACAATTGATTATTTCCACATTTGGAATATCCAACAGGAAGGCTTATCCAGCAATAGATGTGGAATTCCCCCTGCTCACTCTCTTCCCTTTACACCTGGGCTGTGTCTCGGTAGTCTAAACAGCCTTCCTCGTCTCCTTACCCTCATCTGCACTTATCTGAAAGAATTGAACATTTACTGAAATGAAAGTCCAGTCGGCTAAATTATGGAGTGTGCTTCTTTGACAACTTTGCTTTTACTCATCAACTCCCTTAAGTAGGGAAGGTTGGTAGGCCTACTACTTTACACTATTGAGACGCAGCCCCCACAGTGCAAAACCCTCTCCCATAGGGCTGTCGTGAGAAGGGAGAGGGTAAGGCCACACGTGCCTTCAAACTGGAGCTCTGCTATTCATCTGGGTCACGTTCAGTCCTGTAACGTGCATCCACCTACCCAGGTGGCGTGTAACTTTATAGGACCTTCAGATGGGAATTTATTGAACAGACATGTTTCTTTGTCCTGAAGAATAGGGAATCGTTGTCAGCTATATAGAACGTGGCACCCTCCTGAATGCGACCCTTGTCAACAGTGTCTGTCTTCTAGACTTCTCTCGTTCAGGCTTGACTGCCATTTCCAAAGCTACAGATCATTTTGATTCTGTGATTGACtaaagagaggggtggggggtgtatTTCAGTGTCGTTATTAATGAATAGCTGGGCTGAAATGTTAACCATGATTTTGTACACGTTTTGTTTTAACGTTTCCTCCCAACATTATTATTTATGAATTGTGAACGGGCTGTACCTCTCAGCATAGAAATGTGAGGGGCAGAATGTTTGTTTTGATGATAACATGAGATTACATTGTTAAACGGTGACAGTCTTCAGCTATCCTCCGA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2334749 True 2184 TUCP 0.45 2 2799781 2802001

Neighbor


gene id symbol gene type direction distance location
rnpepl1 rnpepl1 coding upstream 734 2764403 ~ 2799047 (+)
abcc5 LOC106580650 coding upstream 47732 2688004 ~ 2752049 (+)
rpl35a LOC106612432 coding upstream 114043 2670319 ~ 2685738 (+)
LOC110507330 LOC106580646 coding upstream 149235 2567766 ~ 2650546 (+)
LOC110507331 NA coding upstream 204156 2585011 ~ 2595625 (+)
LOC110507256 LOC106612406 coding downstream 6282 2808283 ~ 2810261 (+)
LOC110507334 LOC106612406 coding downstream 11648 2813649 ~ 2815411 (+)
LOC118944765 NA coding downstream 48952 2850953 ~ 2854454 (+)
LOC110507335 NA coding downstream 79627 2881628 ~ 2889241 (+)
LOC110507336 LOC106566134 coding downstream 100804 2902805 ~ 2916027 (+)
G2040761 NA non-coding upstream 56484 2742942 ~ 2743297 (+)
G2040842 NA non-coding upstream 59743 2722287 ~ 2740038 (+)
G2040790 NA non-coding upstream 156389 2553119 ~ 2643392 (+)
G2040774 LOC106580643 non-coding upstream 270811 2528011 ~ 2528970 (+)
G2040768 NA non-coding upstream 279475 2518728 ~ 2520306 (+)
G2040865 NA non-coding downstream 401 2802402 ~ 2802622 (+)
G2040874 NA non-coding downstream 9510 2811511 ~ 2812731 (+)
G2040877 NA non-coding downstream 13841 2815842 ~ 2890204 (+)
G2040899 NA non-coding downstream 46412 2848413 ~ 2848934 (+)
G2040923 NA non-coding downstream 96701 2898702 ~ 2898924 (+)
G2040773 LOC106580643 other upstream 257432 2533894 ~ 2542349 (+)
G2040180 atg16l1 other upstream 1144445 1652840 ~ 1655336 (+)
G2040080 NA other upstream 1301216 1442677 ~ 1498565 (+)
LOC110507300 NA other upstream 1981313 817321 ~ 831714 (+)
G2040882 NA other downstream 32095 2834096 ~ 2838927 (+)
G2043193 NA other downstream 1603457 4405458 ~ 4406126 (+)
LOC110507374 spa17 other downstream 1883884 4685868 ~ 4692872 (+)
LOC110507397 sfr16 other downstream 3089846 5874691 ~ 5896127 (+)

Expression



Co-expression Network