G2040865


Basic Information

Item Value
gene id G2040865
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2802402 ~ 2802622 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2334751
ggtgcatataagcagacaatgaaagcacttacaatatttgatgattacatttctctaaaacaggctataggctacatgtacaccaccaagtcagaacagtaggctaaattaagaggggtaaatagaccaaattattaaggtgaggcacatgggctactaacagcttactacacaacatacacttggaatgactttcttagctacagtatacatatctccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2334751 True 221 lncRNA 0.38 1 2802402 2802622

Neighbor

gene id symbol gene type direction distance location
rnpepl1 rnpepl1 coding upstream 3355 2764403 ~ 2799047 (+)
abcc5 LOC106580650 coding upstream 50353 2688004 ~ 2752049 (+)
rpl35a LOC106612432 coding upstream 116664 2670319 ~ 2685738 (+)
LOC110507330 LOC106580646 coding upstream 151856 2567766 ~ 2650546 (+)
LOC110507331 NA coding upstream 206777 2585011 ~ 2595625 (+)
LOC110507256 LOC106612406 coding downstream 5661 2808283 ~ 2810261 (+)
LOC110507334 LOC106612406 coding downstream 11027 2813649 ~ 2815411 (+)
LOC118944765 NA coding downstream 48331 2850953 ~ 2854454 (+)
LOC110507335 NA coding downstream 79006 2881628 ~ 2889241 (+)
LOC110507336 LOC106566134 coding downstream 100183 2902805 ~ 2916027 (+)
G2040761 NA non-coding upstream 59105 2742942 ~ 2743297 (+)
G2040842 NA non-coding upstream 62364 2722287 ~ 2740038 (+)
G2040790 NA non-coding upstream 159010 2553119 ~ 2643392 (+)
G2040774 LOC106580643 non-coding upstream 273432 2528011 ~ 2528970 (+)
G2040768 NA non-coding upstream 282096 2518728 ~ 2520306 (+)
G2040874 NA non-coding downstream 8889 2811511 ~ 2812731 (+)
G2040877 NA non-coding downstream 13220 2815842 ~ 2890204 (+)
G2040899 NA non-coding downstream 45791 2848413 ~ 2848934 (+)
G2040923 NA non-coding downstream 96080 2898702 ~ 2898924 (+)
G2040863 NA other upstream 401 2799781 ~ 2802001 (+)
G2040773 LOC106580643 other upstream 260053 2533894 ~ 2542349 (+)
G2040180 atg16l1 other upstream 1147066 1652840 ~ 1655336 (+)
G2040080 NA other upstream 1303837 1442677 ~ 1498565 (+)
G2040882 NA other downstream 31474 2834096 ~ 2838927 (+)
G2043193 NA other downstream 1602836 4405458 ~ 4406126 (+)
LOC110507374 spa17 other downstream 1883263 4685868 ~ 4692872 (+)
LOC110507397 sfr16 other downstream 3089225 5874691 ~ 5896127 (+)

Expression


Co-expression Network