G2040927


Basic Information

Item Value
gene id G2040927
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2906817 ~ 2907037 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2334825
atttgattaattgttcagcagtcttatgacttgagggtagaagctgttaaggagccttttggttctagacttggcgctccggtatcgcttgccgtgcggtagcagagaaaacagtctatgacttgggtgactaacgattttatgggctttcctctgacaccgcctattatataggtcctggatggcaggaagcttggccccagtgatgtactgggccgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2334825 True 221 lncRNA 0.48 1 2906817 2907037

Neighbor

gene id symbol gene type direction distance location
LOC110507335 NA coding upstream 17576 2881628 ~ 2889241 (+)
LOC118944765 NA coding upstream 52363 2850953 ~ 2854454 (+)
LOC110507334 LOC106612406 coding upstream 91406 2813649 ~ 2815411 (+)
LOC110507256 LOC106612406 coding upstream 96556 2808283 ~ 2810261 (+)
rnpepl1 rnpepl1 coding upstream 107770 2764403 ~ 2799047 (+)
ano7 LOC106580699 coding downstream 73976 2981013 ~ 3029319 (+)
LOC118944768 NA coding downstream 137508 3044545 ~ 3046330 (+)
rnf168 LOC106580664 coding downstream 157865 3064902 ~ 3073180 (+)
LOC110507257 LOC106580698 coding downstream 176668 3083705 ~ 3085115 (+)
LOC110507341 LOC106580714 coding downstream 200414 3107451 ~ 3113758 (+)
LOC110507336 LOC106566134 non-coding upstream 3446 2902805 ~ 2916027 (+)
G2040923 NA non-coding upstream 7893 2898702 ~ 2898924 (+)
G2040877 NA non-coding upstream 16613 2815842 ~ 2890204 (+)
G2040899 NA non-coding upstream 57883 2848413 ~ 2848934 (+)
G2040874 NA non-coding upstream 94086 2811511 ~ 2812731 (+)
G2040928 NA non-coding downstream 358 2907395 ~ 2908036 (+)
G2040929 LOC100136012 non-coding downstream 1103 2908140 ~ 2908375 (+)
G2040930 NA non-coding downstream 1456 2908493 ~ 2908718 (+)
G2040933 NA non-coding downstream 4200 2911237 ~ 2913371 (+)
G2040935 NA non-coding downstream 9389 2916426 ~ 2916722 (+)
G2040882 NA other upstream 67890 2834096 ~ 2838927 (+)
G2040863 NA other upstream 104816 2799781 ~ 2802001 (+)
rpl35a LOC106612432 other upstream 221079 2670319 ~ 2685738 (+)
G2040773 LOC106580643 other upstream 364468 2533894 ~ 2542349 (+)
G2043193 NA other downstream 1498421 4405458 ~ 4406126 (+)
LOC110507374 spa17 other downstream 1778848 4685868 ~ 4692872 (+)
LOC110507397 sfr16 other downstream 2984810 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 2990480 5897208 ~ 5910058 (+)
G2045522 NA other downstream 3587796 6494833 ~ 6495134 (+)

Expression


Co-expression Network