G2040945


Basic Information

Item Value
gene id G2040945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2928760 ~ 2928974 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2334845
ggaacaacgaCTAGTAGGCTCAgggcgagtgacgtttgaaacgctattagcgcgcactaactagccagccatttcacttcggtcacaacagcctcatctcgggagttgataggcttgaagtcataaacagctcaatgcttgacgcacaacgaagagctgctggcaaaacgcacaaaagtgctgatTGAATGAAtatttacgcgcctgcttctgcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2334845 True 215 lncRNA 0.49 1 2928760 2928974

Neighbor

gene id symbol gene type direction distance location
LOC110507336 LOC106566134 coding upstream 12733 2902805 ~ 2916027 (+)
LOC110507335 NA coding upstream 39519 2881628 ~ 2889241 (+)
LOC118944765 NA coding upstream 74306 2850953 ~ 2854454 (+)
LOC110507334 LOC106612406 coding upstream 113349 2813649 ~ 2815411 (+)
LOC110507256 LOC106612406 coding upstream 118499 2808283 ~ 2810261 (+)
ano7 LOC106580699 coding downstream 52039 2981013 ~ 3029319 (+)
LOC118944768 NA coding downstream 115571 3044545 ~ 3046330 (+)
rnf168 LOC106580664 coding downstream 135928 3064902 ~ 3073180 (+)
LOC110507257 LOC106580698 coding downstream 154731 3083705 ~ 3085115 (+)
LOC110507341 LOC106580714 coding downstream 178477 3107451 ~ 3113758 (+)
G2040939 NA non-coding upstream 6976 2920934 ~ 2921784 (+)
G2040938 NA non-coding upstream 8649 2919880 ~ 2920111 (+)
G2040936 NA non-coding upstream 10167 2918301 ~ 2918593 (+)
G2040934 NA non-coding upstream 11301 2917241 ~ 2917459 (+)
G2040935 NA non-coding upstream 12038 2916426 ~ 2916722 (+)
G2040949 NA non-coding downstream 3458 2932432 ~ 2932890 (+)
G2040950 NA non-coding downstream 4079 2933053 ~ 2933349 (+)
G2040952 NA non-coding downstream 5245 2934219 ~ 2934525 (+)
G2040960 NA non-coding downstream 26601 2955575 ~ 2955786 (+)
G2040961 NA non-coding downstream 27466 2956440 ~ 2956662 (+)
G2040882 NA other upstream 89833 2834096 ~ 2838927 (+)
G2040863 NA other upstream 126759 2799781 ~ 2802001 (+)
rpl35a LOC106612432 other upstream 243022 2670319 ~ 2685738 (+)
G2040773 LOC106580643 other upstream 386411 2533894 ~ 2542349 (+)
G2043193 NA other downstream 1476484 4405458 ~ 4406126 (+)
LOC110507374 spa17 other downstream 1756911 4685868 ~ 4692872 (+)
LOC110507397 sfr16 other downstream 2962873 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 2968543 5897208 ~ 5910058 (+)
G2045522 NA other downstream 3565859 6494833 ~ 6495134 (+)

Expression


Co-expression Network