G2040950


Basic Information

Item Value
gene id G2040950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2933053 ~ 2933349 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2334850
TGGTAATTTGACAGTCAGTGCTTTGGTATTGCAAAGACGTGACTTCATGATAGAtttttgtgtgtaatgtatgttaagtgtgtttagtgttttgcaaatcactgtgtgtagagttttgcaaCAAGTGTGAGGTTGACAATGTGCTTATAGTTGTGCAAATATGGGCTGATGTTTTGCTTCTTGAGTGTAAGGTTTTgctaatagtgtactacttttaattTTAGTGTTTAAGCAATCCAAAAAAACTGtaatttatttatgtggatgaggttggcttcaacctcaccaaaaccaggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2334850 True 297 lncRNA 0.35 1 2933053 2933349

Neighbor

gene id symbol gene type direction distance location
LOC110507336 LOC106566134 coding upstream 17026 2902805 ~ 2916027 (+)
LOC110507335 NA coding upstream 43812 2881628 ~ 2889241 (+)
LOC118944765 NA coding upstream 78599 2850953 ~ 2854454 (+)
LOC110507334 LOC106612406 coding upstream 117642 2813649 ~ 2815411 (+)
LOC110507256 LOC106612406 coding upstream 122792 2808283 ~ 2810261 (+)
ano7 LOC106580699 coding downstream 47664 2981013 ~ 3029319 (+)
LOC118944768 NA coding downstream 111196 3044545 ~ 3046330 (+)
rnf168 LOC106580664 coding downstream 131553 3064902 ~ 3073180 (+)
LOC110507257 LOC106580698 coding downstream 150356 3083705 ~ 3085115 (+)
LOC110507341 LOC106580714 coding downstream 174102 3107451 ~ 3113758 (+)
G2040949 NA non-coding upstream 163 2932432 ~ 2932890 (+)
G2040945 NA non-coding upstream 4079 2928760 ~ 2928974 (+)
G2040939 NA non-coding upstream 11269 2920934 ~ 2921784 (+)
G2040938 NA non-coding upstream 12942 2919880 ~ 2920111 (+)
G2040936 NA non-coding upstream 14460 2918301 ~ 2918593 (+)
G2040952 NA non-coding downstream 870 2934219 ~ 2934525 (+)
G2040960 NA non-coding downstream 22226 2955575 ~ 2955786 (+)
G2040961 NA non-coding downstream 23091 2956440 ~ 2956662 (+)
G2041963 NA non-coding downstream 98545 3031894 ~ 3032134 (+)
G2042038 NA non-coding downstream 155103 3088452 ~ 3130592 (+)
G2040882 NA other upstream 94126 2834096 ~ 2838927 (+)
G2040863 NA other upstream 131052 2799781 ~ 2802001 (+)
rpl35a LOC106612432 other upstream 247315 2670319 ~ 2685738 (+)
G2040773 LOC106580643 other upstream 390704 2533894 ~ 2542349 (+)
G2043193 NA other downstream 1472109 4405458 ~ 4406126 (+)
LOC110507374 spa17 other downstream 1752536 4685868 ~ 4692872 (+)
LOC110507397 sfr16 other downstream 2958498 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 2964168 5897208 ~ 5910058 (+)
G2045522 NA other downstream 3561484 6494833 ~ 6495134 (+)

Expression


Co-expression Network