G2042133


Basic Information

Item Value
gene id G2042133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 3214899 ~ 3215801 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2336182
AAACGTATTAAGATTTGATACGCTTTATGCTTGTGTGGTAAAATAGTTGATATTTTGATTGTATGATTGAGATTAGGTTTACGCTACACTTTcatgaacggacaaacattgcgtgactaaggtcacttgagttccctgaactcctttaccgggctggactcttttaGGCCCAAGGTACAGGACttttctggaggaaccagagcTCATTATTTGTTATATTATTGTGTGATCATTTATGTTAATACAACCCATGCAAAATAATACAATTGTTTGGAAGTTAtttccaatgttttaagggtttgtGAAAAGTGTATGTCCATCCTGACTTTctacataagtcctttgtattggtgtagacttgacggaccagacGAGACTCATTCCCTTCTAAACCAAAAGGAGAAATCAatattttctctggtaggcacaacctacctggcacccctataaacaATAaactcaagtcaaaaccgttacaaggcacacttaaccagcatggttaccacagcaaactccttcaagactgttggaaaagcattccaggtgaagctggttgaaaaaaatgccaagagtgtgcaaagctgttatcaaggcaaagggtagctatttgaagaatctcaaatataaaatatattttgatttgtttaacacttttttttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2336182 True 660 lncRNA 0.37 2 3214899 3215801
Loading

Neighbor

gene id symbol gene type direction distance location
clrn1 clrn1 coding upstream 39764 3158473 ~ 3175135 (+)
LOC110507044 gpr171 coding upstream 75271 3129908 ~ 3139628 (+)
LOC110507342 gpr171 coding upstream 89472 3119813 ~ 3125427 (+)
LOC110507341 LOC106580714 coding upstream 101141 3107451 ~ 3113758 (+)
LOC110507257 LOC106580698 coding upstream 129784 3083705 ~ 3085115 (+)
LOC110507347 NA coding downstream 39563 3255364 ~ 3259878 (+)
LOC110507350 LOC106580677 coding downstream 167560 3383361 ~ 3428112 (+)
LOC110507352 NA coding downstream 180197 3395998 ~ 3397797 (+)
LOC110507354 LOC106612447 coding downstream 213499 3429300 ~ 3451905 (+)
mmp28 LOC106580680 coding downstream 236403 3452204 ~ 3483683 (+)
G2042038 NA non-coding upstream 84307 3088452 ~ 3130592 (+)
G2041963 NA non-coding upstream 182765 3031894 ~ 3032134 (+)
G2040961 NA non-coding upstream 258237 2956440 ~ 2956662 (+)
G2040960 NA non-coding upstream 259113 2955575 ~ 2955786 (+)
G2040952 NA non-coding upstream 280374 2934219 ~ 2934525 (+)
G2042105 NA non-coding downstream 8624 3224425 ~ 3225239 (+)
G2042136 LOC106600457 non-coding downstream 14352 3230153 ~ 3230442 (+)
G2042138 NA non-coding downstream 17327 3233128 ~ 3233789 (+)
G2042139 NA non-coding downstream 18317 3234118 ~ 3234567 (+)
G2042088 NA non-coding downstream 18850 3234651 ~ 3235554 (+)
G2040882 NA other upstream 375972 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 399558 2813649 ~ 2815411 (+)
G2040863 NA other upstream 412898 2799781 ~ 2802001 (+)
rpl35a LOC106612432 other upstream 529161 2670319 ~ 2685738 (+)
G2040773 LOC106580643 other upstream 672550 2533894 ~ 2542349 (+)
G2043193 NA other downstream 1189657 4405458 ~ 4406126 (+)
LOC110507374 spa17 other downstream 1470084 4685868 ~ 4692872 (+)
LOC110507397 sfr16 other downstream 2676046 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 2681716 5897208 ~ 5910058 (+)
G2045522 NA other downstream 3279032 6494833 ~ 6495134 (+)

Expression

G2042133 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G2042133 Expression in each Bioproject

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G2042133 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network