G2042608


Basic Information

Item Value
gene id G2042608
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 3400579 ~ 3402997 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2336713
TCTGGGAATGCTGCAAAGTCCAGAAATTGTGGGCGGAAATAGAAAGATGGCTGCCAGAAGTATTACAAATGTAAACATACTTTTAATccatctgtctgcatatttcaagacatggcaacCCGATGGGTTGGACAATTCTCTTCTAatcactcatcttgaaaaaacTAAAATCAATCAATCCGCCATCATTAACACACAGGAAAATtctaattatttattatttaaatattgaaaGTGCGTGGGCtatggagagaaacaaaatggtgcagtttcaGGCCATGTCGCGATGCAGGCGCTGTAGATgtgggtgtgtgttagtgggtctgGCAGGTTTCCGCAAGATAAATCTAAGACTTTATTAATACTTTTTAATGCCACTTGGAATGCAATTTCAGACCAATTCTACAACAAAAGACCTCTGCAAAAagtactgaaggacaccaattaCTGAAGTTTAGGGACATTGTGCAAATGTGTTCATTAACAAGGAAACAGTTAAAGTACAGGGTTGACATTGTAACCAACAGCGCAATGTTAAAtgcatataaaaaataaaacaattgctGATGCCAATCCACTACCTACCAGACCTGGGACAACTTCAACTACGCTCAAAATGAAGGGAAGAAACaacttgctctcctctctctgtcaaattgtactacaccggctccaacgctcgtcAGATGAGGCAGGGCTTGccaactattacagactacaaagggaagcacagccgagagctgcccagtgacaagcctaccagatgagctaaattactctgttcgcttcgaggcaagtaacactgaaacatgcatgacagCAGCAGTTGTTCcgaacgactgtgtgatcacactctccgcagccgatgcgagtaagacctttaaacaggtcaacattcacaaggtcgcagggccagacagattaccaggatgagtactccaagcatgcgctgaccaactggcaagtgtcttcactgacattttgaacctcaacacaattatcccagaaaccaaattgcataccgccccaacggATCCAATCTCTActgtactccacactgccatttcacaccaggacaaaacaaacacctatgtgagaaggctattcactgactacagctcagagttcaacaccatagtgccttcaaagctcattactaagctaaggaccctgacactaaacacctccctctgcaactggatcctggacttcctgatggctcgcccccaggtggtaagggtaggtaacaacatactCGCTACGCTGATCCTTAGCACACATCCGACGGGCCCcgtgttcagtcccctcctgtactctctgttcactcattaagtttgccgatgacacaacggtgtctgatcaccaacaacgacgagacagaatatagggaggaggtcagagacctggccgtgtggtgccaggacaacaacctctccctcgatGTGATCGGgattaaggagatgattgtggacccattctcatcgacggggctgtagtggagcaggttggcatgggtcctcagatcctcaaaaggttctatagctgtaccatcgagagcaactgaggacccatgccaaatcttttcagtctcctaagggggaataggttttgtcgtgccctcttcacgactgtcttggaccatattagtttgttggtgatctggacaccaaggaacttgaagctctcaacctgctccactacagccccgtcgatgagaatgggtccACAATCATcatgcaactgctcggcctccgaccacaaggcactacagagggcagtgagtacggcccagtacatcaccggggccaagcttcctgccatccaggacctatataccaggcggtgtccgaggaaggccctaaaaattgtcaaagactccagccaccctagtcatagactgttctctctgctaccacacggaaaacggtaccggagcgccaagtctaggtccaagaggcttccaaacagcttctacccccaagcctactgaacatctaatcaaatggctacccagatctcttgcattgcccccccccccccccccacctttacactactgctactcttaTTATAAATGCATAAGTCACTTAAATAATTCTacccacacacatatatatacacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacagaaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2336713 True 2308 TUCP 0.46 2 3400579 3402997

Neighbor

gene id symbol gene type direction distance location
gdpd1 gdpd1 coding downstream 15982 3358469 ~ 3384597 (-)
LOC110507349 LOC106580654 coding downstream 50602 3315085 ~ 3349977 (-)
LOC110507348 LOC106580655 coding downstream 92540 3282492 ~ 3308039 (-)
LOC110507346 eif2a coding downstream 145466 3247810 ~ 3255113 (-)
tsen34 tsen34 coding downstream 160346 3237401 ~ 3240233 (-)
LOC110507355 LOC104924156 coding upstream 82282 3485279 ~ 3517446 (-)
LOC110507356 LOC106580682 coding upstream 136032 3539029 ~ 3718487 (-)
LOC118944783 LOC106580716 coding upstream 316133 3719130 ~ 3726268 (-)
LOC110507640 LOC106580716 coding upstream 326980 3729977 ~ 3734931 (-)
LOC118944734 LOC106580716 coding upstream 332457 3735454 ~ 3740068 (-)
G2042603 NA non-coding downstream 11061 3383772 ~ 3389518 (-)
G2042585 NA non-coding downstream 34560 3353350 ~ 3366019 (-)
G2042552 NA non-coding downstream 87052 3312504 ~ 3313527 (-)
G2042546 NA non-coding downstream 113128 3287215 ~ 3287451 (-)
G2042542 NA non-coding downstream 118755 3278882 ~ 3281824 (-)
G2042657 NA non-coding upstream 116000 3518997 ~ 3519303 (-)
G2042663 NA non-coding upstream 125530 3528527 ~ 3528747 (-)
G2042669 NA non-coding upstream 133624 3536621 ~ 3537071 (-)
G2042671 NA non-coding upstream 140046 3543043 ~ 3543362 (-)
G2041885 NA other downstream 501191 2898987 ~ 2899388 (-)
G2041883 NA other downstream 504188 2895576 ~ 2896391 (-)
LOC110507298 spcs2 other downstream 2629842 769005 ~ 776178 (-)
G2043460 NA other upstream 940602 4343599 ~ 4348409 (-)
G2043483 NA other upstream 975937 4378934 ~ 4379429 (-)
G2043518 NA other upstream 1011068 4414065 ~ 4414423 (-)
kmt2a kmt2a other upstream 2138030 5531877 ~ 5586139 (-)

Expression


Co-expression Network