Gene
RNA
| Item | Value |
|---|---|
| gene id | G2042840 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 3831560 ~ 3831765 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: mitochondrial glutamate carrier 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2336960 | True | 206 | lncRNA | 0.54 | 1 | 3831560 | 3831765 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944719 | LOC106580716 | coding | downstream | 77914 | 3746369 ~ 3753646 (-) |
| LOC118944734 | LOC106580716 | coding | downstream | 91492 | 3735454 ~ 3740068 (-) |
| LOC110507640 | LOC106580716 | coding | downstream | 96629 | 3729977 ~ 3734931 (-) |
| LOC118944783 | LOC106580716 | coding | downstream | 105292 | 3719130 ~ 3726268 (-) |
| LOC110507356 | LOC106580682 | coding | downstream | 113073 | 3539029 ~ 3718487 (-) |
| LOC110507357 | shox2 | coding | upstream | 49691 | 3881456 ~ 3889257 (-) |
| LOC110507359 | med29 | coding | upstream | 312457 | 4144222 ~ 4148910 (-) |
| sik2b | sik2 | coding | upstream | 369177 | 4200942 ~ 4268979 (-) |
| laynb | layn | coding | upstream | 438697 | 4270462 ~ 4276432 (-) |
| zgc:162608 | LOC106612462 | coding | upstream | 459635 | 4291400 ~ 4298680 (-) |
| G2042822 | NA | non-coding | downstream | 31686 | 3798525 ~ 3799874 (-) |
| G2042816 | NA | non-coding | downstream | 34513 | 3796760 ~ 3797047 (-) |
| G2042806 | NA | non-coding | downstream | 41608 | 3789738 ~ 3789952 (-) |
| G2042787 | LOC107579696 | non-coding | downstream | 63698 | 3767402 ~ 3767862 (-) |
| G2042848 | NA | non-coding | upstream | 8094 | 3839859 ~ 3840099 (-) |
| G2042874 | NA | non-coding | upstream | 33605 | 3865370 ~ 3865618 (-) |
| G2043227 | NA | non-coding | upstream | 86700 | 3918465 ~ 3953916 (-) |
| G2043337 | NA | non-coding | upstream | 239340 | 4071105 ~ 4071917 (-) |
| G2043373 | NA | non-coding | upstream | 361028 | 4192793 ~ 4193567 (-) |
| G2042608 | NA | other | downstream | 428563 | 3400579 ~ 3402997 (-) |
| G2041885 | NA | other | downstream | 932172 | 2898987 ~ 2899388 (-) |
| G2041883 | NA | other | downstream | 935169 | 2895576 ~ 2896391 (-) |
| LOC110507298 | spcs2 | other | downstream | 3060823 | 769005 ~ 776178 (-) |
| G2043460 | NA | other | upstream | 511834 | 4343599 ~ 4348409 (-) |
| G2043483 | NA | other | upstream | 547169 | 4378934 ~ 4379429 (-) |
| G2043518 | NA | other | upstream | 582300 | 4414065 ~ 4414423 (-) |
| kmt2a | kmt2a | other | upstream | 1709262 | 5531877 ~ 5586139 (-) |
| G2045223 | LOC106612485 | other | upstream | 2036810 | 5868575 ~ 5870139 (-) |
