Gene
RNA
| Item | Value |
|---|---|
| gene id | G2043374 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 4195279 ~ 4196134 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2337516 | True | 856 | lncRNA | 0.43 | 1 | 4195279 | 4196134 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507359 | med29 | coding | downstream | 46369 | 4144222 ~ 4148910 (-) |
| LOC110507357 | shox2 | coding | downstream | 306022 | 3881456 ~ 3889257 (-) |
| LOC118944719 | LOC106580716 | coding | downstream | 441633 | 3746369 ~ 3753646 (-) |
| LOC118944734 | LOC106580716 | coding | downstream | 455211 | 3735454 ~ 3740068 (-) |
| LOC110507640 | LOC106580716 | coding | downstream | 460348 | 3729977 ~ 3734931 (-) |
| sik2b | sik2 | coding | upstream | 4808 | 4200942 ~ 4268979 (-) |
| laynb | layn | coding | upstream | 74328 | 4270462 ~ 4276432 (-) |
| zgc:162608 | LOC106612462 | coding | upstream | 95266 | 4291400 ~ 4298680 (-) |
| drd2a | d2r2 | coding | upstream | 275917 | 4472051 ~ 4505952 (-) |
| scn3b | LOC106612464 | coding | upstream | 354091 | 4550225 ~ 4572371 (-) |
| G2043373 | NA | non-coding | downstream | 1712 | 4192793 ~ 4193567 (-) |
| G2043337 | NA | non-coding | downstream | 123362 | 4071105 ~ 4071917 (-) |
| G2043227 | NA | non-coding | downstream | 241363 | 3918465 ~ 3953916 (-) |
| G2042874 | NA | non-coding | downstream | 329661 | 3865370 ~ 3865618 (-) |
| G2042848 | NA | non-coding | downstream | 355180 | 3839859 ~ 3840099 (-) |
| G2043439 | NA | non-coding | upstream | 119568 | 4315702 ~ 4316070 (-) |
| G2043441 | NA | non-coding | upstream | 121659 | 4317793 ~ 4318109 (-) |
| G2043442 | NA | non-coding | upstream | 122769 | 4318903 ~ 4319268 (-) |
| G2043443 | NA | non-coding | upstream | 123974 | 4320108 ~ 4320351 (-) |
| G2043446 | NA | non-coding | upstream | 127465 | 4323599 ~ 4323821 (-) |
| LOC110507356 | LOC106580682 | other | downstream | 653526 | 3539029 ~ 3718487 (-) |
| G2042608 | NA | other | downstream | 792282 | 3400579 ~ 3402997 (-) |
| G2041885 | NA | other | downstream | 1295891 | 2898987 ~ 2899388 (-) |
| G2041883 | NA | other | downstream | 1298888 | 2895576 ~ 2896391 (-) |
| LOC110507298 | spcs2 | other | downstream | 3424542 | 769005 ~ 776178 (-) |
| G2043460 | NA | other | upstream | 147465 | 4343599 ~ 4348409 (-) |
| G2043483 | NA | other | upstream | 182800 | 4378934 ~ 4379429 (-) |
| G2043518 | NA | other | upstream | 217931 | 4414065 ~ 4414423 (-) |
| kmt2a | kmt2a | other | upstream | 1344893 | 5531877 ~ 5586139 (-) |
| G2045223 | LOC106612485 | other | upstream | 1672441 | 5868575 ~ 5870139 (-) |
