Gene
RNA
| Item | Value |
|---|---|
| gene id | G2043455 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 4336448 ~ 4336845 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110507048 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2337601 | True | 398 | lncRNA | 0.65 | 1 | 4336448 | 4336845 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:162608 | LOC106612462 | coding | downstream | 37768 | 4291400 ~ 4298680 (-) |
| laynb | layn | coding | downstream | 60016 | 4270462 ~ 4276432 (-) |
| sik2b | sik2 | coding | downstream | 67469 | 4200942 ~ 4268979 (-) |
| LOC110507359 | med29 | coding | downstream | 187538 | 4144222 ~ 4148910 (-) |
| LOC110507357 | shox2 | coding | downstream | 447191 | 3881456 ~ 3889257 (-) |
| drd2a | d2r2 | coding | upstream | 135206 | 4472051 ~ 4505952 (-) |
| scn3b | LOC106612464 | coding | upstream | 213380 | 4550225 ~ 4572371 (-) |
| LOC110507371 | NA | coding | upstream | 236185 | 4573030 ~ 4626743 (-) |
| ccdc153 | ccdc153 | coding | upstream | 1009483 | 5346328 ~ 5350245 (-) |
| LOC110507384 | mcam | coding | upstream | 1106170 | 5443015 ~ 5490555 (-) |
| G2043449 | NA | non-coding | downstream | 10045 | 4326165 ~ 4326403 (-) |
| G2043447 | NA | non-coding | downstream | 11962 | 4324058 ~ 4324486 (-) |
| G2043446 | NA | non-coding | downstream | 12627 | 4323599 ~ 4323821 (-) |
| G2043443 | NA | non-coding | downstream | 16097 | 4320108 ~ 4320351 (-) |
| G2043442 | NA | non-coding | downstream | 17180 | 4318903 ~ 4319268 (-) |
| G2043456 | NA | non-coding | upstream | 1238 | 4338083 ~ 4338312 (-) |
| G2043457 | NA | non-coding | upstream | 2207 | 4339052 ~ 4339603 (-) |
| G2043471 | NA | non-coding | upstream | 24279 | 4361124 ~ 4361880 (-) |
| G2043476 | NA | non-coding | upstream | 28251 | 4365096 ~ 4365398 (-) |
| G2043496 | NA | non-coding | upstream | 57446 | 4394291 ~ 4394714 (-) |
| LOC110507356 | LOC106580682 | other | downstream | 794695 | 3539029 ~ 3718487 (-) |
| G2042608 | NA | other | downstream | 933451 | 3400579 ~ 3402997 (-) |
| G2041885 | NA | other | downstream | 1437060 | 2898987 ~ 2899388 (-) |
| G2041883 | NA | other | downstream | 1440057 | 2895576 ~ 2896391 (-) |
| LOC110507298 | spcs2 | other | downstream | 3565711 | 769005 ~ 776178 (-) |
| G2043460 | NA | other | upstream | 6754 | 4343599 ~ 4348409 (-) |
| G2043483 | NA | other | upstream | 42089 | 4378934 ~ 4379429 (-) |
| G2043518 | NA | other | upstream | 77220 | 4414065 ~ 4414423 (-) |
| kmt2a | kmt2a | other | upstream | 1204182 | 5531877 ~ 5586139 (-) |
| G2045223 | LOC106612485 | other | upstream | 1531730 | 5868575 ~ 5870139 (-) |
