Gene
RNA
| Item | Value |
|---|---|
| gene id | G2043501 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 4397145 ~ 4397418 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tetratricopeptide repeat protein 12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2337647 | True | 274 | lncRNA | 0.51 | 1 | 4397145 | 4397418 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:162608 | LOC106612462 | coding | downstream | 98465 | 4291400 ~ 4298680 (-) |
| laynb | layn | coding | downstream | 120713 | 4270462 ~ 4276432 (-) |
| sik2b | sik2 | coding | downstream | 128166 | 4200942 ~ 4268979 (-) |
| LOC110507359 | med29 | coding | downstream | 248235 | 4144222 ~ 4148910 (-) |
| LOC110507357 | shox2 | coding | downstream | 507888 | 3881456 ~ 3889257 (-) |
| drd2a | d2r2 | coding | upstream | 74633 | 4472051 ~ 4505952 (-) |
| scn3b | LOC106612464 | coding | upstream | 152807 | 4550225 ~ 4572371 (-) |
| LOC110507371 | NA | coding | upstream | 175612 | 4573030 ~ 4626743 (-) |
| ccdc153 | ccdc153 | coding | upstream | 948910 | 5346328 ~ 5350245 (-) |
| LOC110507384 | mcam | coding | upstream | 1045597 | 5443015 ~ 5490555 (-) |
| G2043500 | NA | non-coding | downstream | 25 | 4396910 ~ 4397120 (-) |
| G2043499 | NA | non-coding | downstream | 709 | 4395878 ~ 4396436 (-) |
| G2043498 | NA | non-coding | downstream | 1284 | 4395642 ~ 4395861 (-) |
| G2043497 | NA | non-coding | downstream | 1721 | 4394973 ~ 4395424 (-) |
| G2043496 | NA | non-coding | downstream | 2431 | 4394291 ~ 4394714 (-) |
| G2043504 | NA | non-coding | upstream | 2402 | 4399820 ~ 4400196 (-) |
| G2043505 | NA | non-coding | upstream | 3090 | 4400508 ~ 4400815 (-) |
| G2043510 | NA | non-coding | upstream | 8388 | 4405806 ~ 4406027 (-) |
| G2043511 | NA | non-coding | upstream | 9115 | 4406533 ~ 4406809 (-) |
| G2043512 | NA | non-coding | upstream | 9917 | 4407335 ~ 4407548 (-) |
| G2043483 | NA | other | downstream | 17716 | 4378934 ~ 4379429 (-) |
| G2043460 | NA | other | downstream | 48736 | 4343599 ~ 4348409 (-) |
| LOC110507356 | LOC106580682 | other | downstream | 855392 | 3539029 ~ 3718487 (-) |
| G2042608 | NA | other | downstream | 994148 | 3400579 ~ 3402997 (-) |
| G2041885 | NA | other | downstream | 1497757 | 2898987 ~ 2899388 (-) |
| G2043518 | NA | other | upstream | 16647 | 4414065 ~ 4414423 (-) |
| kmt2a | kmt2a | other | upstream | 1143609 | 5531877 ~ 5586139 (-) |
| G2045223 | LOC106612485 | other | upstream | 1471157 | 5868575 ~ 5870139 (-) |
| LOC110507410 | LOC106612495 | other | upstream | 1835197 | 6228113 ~ 6235871 (-) |
| LOC110507421 | gemin7 | other | upstream | 2092304 | 6489704 ~ 6491119 (-) |
