Gene
RNA
| Item | Value |
|---|---|
| gene id | G2043200 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 4417994 ~ 4418231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2337332 | True | 238 | lncRNA | 0.39 | 1 | 4417994 | 4418231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-103g5.4 | NA | coding | upstream | 56874 | 4312281 ~ 4361120 (+) |
| LOC118944636 | NA | coding | upstream | 107736 | 4307237 ~ 4310258 (+) |
| LOC110507362 | NA | coding | upstream | 126668 | 4267404 ~ 4291326 (+) |
| ppp2r1bb | LOC104918016 | coding | upstream | 241567 | 4158264 ~ 4176427 (+) |
| LOC110507358 | mlf1 | coding | upstream | 293013 | 3943305 ~ 4124981 (+) |
| ankk1 | NA | coding | downstream | 19156 | 4437387 ~ 4447253 (+) |
| LOC110507258 | LOC106612424 | coding | downstream | 249306 | 4667537 ~ 4670273 (+) |
| LOC110507259 | NA | coding | downstream | 252208 | 4670439 ~ 4674088 (+) |
| LOC110507374 | spa17 | coding | downstream | 267637 | 4685868 ~ 4692872 (+) |
| hepacama | LOC106612425 | coding | downstream | 277491 | 4695722 ~ 4703620 (+) |
| G2043199 | NA | non-coding | upstream | 1166 | 4416499 ~ 4416828 (+) |
| G2043198 | NA | non-coding | upstream | 3245 | 4414473 ~ 4414749 (+) |
| G2043196 | NA | non-coding | upstream | 7770 | 4409990 ~ 4410224 (+) |
| G2043194 | NA | non-coding | upstream | 11556 | 4406200 ~ 4406438 (+) |
| G2043190 | NA | non-coding | upstream | 16175 | 4401582 ~ 4401819 (+) |
| G2043559 | NA | non-coding | downstream | 34719 | 4452950 ~ 4453198 (+) |
| G2043904 | NA | non-coding | downstream | 665401 | 5083632 ~ 5105824 (+) |
| G2043754 | NA | non-coding | downstream | 912902 | 5331133 ~ 5332221 (+) |
| G2043755 | NA | non-coding | downstream | 915012 | 5333243 ~ 5333478 (+) |
| G2044047 | NA | non-coding | downstream | 917086 | 5335317 ~ 5335626 (+) |
| G2043193 | NA | other | upstream | 11868 | 4405458 ~ 4406126 (+) |
| G2040882 | NA | other | upstream | 1579067 | 2834096 ~ 2838927 (+) |
| LOC110507334 | LOC106612406 | other | upstream | 1602653 | 2813649 ~ 2815411 (+) |
| G2040863 | NA | other | upstream | 1615993 | 2799781 ~ 2802001 (+) |
| rpl35a | LOC106612432 | other | upstream | 1732256 | 2670319 ~ 2685738 (+) |
| LOC110507397 | sfr16 | other | downstream | 1473616 | 5874691 ~ 5896127 (+) |
| LOC110507398 | znf296 | other | downstream | 1479286 | 5897208 ~ 5910058 (+) |
| G2045522 | NA | other | downstream | 2076602 | 6494833 ~ 6495134 (+) |
| G2045655 | NA | other | downstream | 2274313 | 6692544 ~ 6693044 (+) |
