Gene
RNA
| Item | Value |
|---|---|
| gene id | G2044621 |
| gene name | LOC107585599 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 5327805 ~ 5328033 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: glutamate receptor ionotropic, kainate 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2338863 | True | 229 | lncRNA | 0.58 | 1 | 5327805 | 5328033 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507371 | NA | coding | downstream | 701062 | 4573030 ~ 4626743 (-) |
| scn3b | LOC106612464 | coding | downstream | 755434 | 4550225 ~ 4572371 (-) |
| drd2a | d2r2 | coding | downstream | 821853 | 4472051 ~ 4505952 (-) |
| zgc:162608 | LOC106612462 | coding | downstream | 1029125 | 4291400 ~ 4298680 (-) |
| laynb | layn | coding | downstream | 1051373 | 4270462 ~ 4276432 (-) |
| ccdc153 | ccdc153 | coding | upstream | 18295 | 5346328 ~ 5350245 (-) |
| LOC110507384 | mcam | coding | upstream | 114982 | 5443015 ~ 5490555 (-) |
| c1qtnf5 | c1qtnf5 | coding | upstream | 194847 | 5522880 ~ 5526800 (-) |
| kmt2a | kmt2a | coding | upstream | 203844 | 5531877 ~ 5586139 (-) |
| LOC110507388 | ube4a | coding | upstream | 263463 | 5591496 ~ 5613273 (-) |
| G2044617 | NA | non-coding | downstream | 3667 | 5323863 ~ 5324138 (-) |
| G2044237 | NA | non-coding | downstream | 546671 | 4779119 ~ 4781134 (-) |
| G2044198 | LOC106612468 | non-coding | downstream | 554753 | 4711558 ~ 4773052 (-) |
| G2044228 | NA | non-coding | downstream | 573265 | 4753113 ~ 4754540 (-) |
| G2044185 | NA | non-coding | downstream | 636676 | 4685851 ~ 4691129 (-) |
| G2044622 | NA | non-coding | upstream | 1016 | 5329049 ~ 5329533 (-) |
| G2044623 | NA | non-coding | upstream | 3350 | 5331383 ~ 5332173 (-) |
| G2044635 | NA | non-coding | upstream | 17835 | 5345868 ~ 5346143 (-) |
| G2044886 | NA | non-coding | upstream | 150643 | 5478676 ~ 5481199 (-) |
| G2043518 | NA | other | downstream | 913382 | 4414065 ~ 4414423 (-) |
| G2043483 | NA | other | downstream | 948376 | 4378934 ~ 4379429 (-) |
| G2043460 | NA | other | downstream | 979396 | 4343599 ~ 4348409 (-) |
| LOC110507356 | LOC106580682 | other | downstream | 1786052 | 3539029 ~ 3718487 (-) |
| G2042608 | NA | other | downstream | 1924808 | 3400579 ~ 3402997 (-) |
| G2045223 | LOC106612485 | other | upstream | 540542 | 5868575 ~ 5870139 (-) |
| LOC110507410 | LOC106612495 | other | upstream | 904582 | 6228113 ~ 6235871 (-) |
| LOC110507421 | gemin7 | other | upstream | 1161689 | 6489704 ~ 6491119 (-) |
| LOC110507418 | NA | other | upstream | 1174382 | 6501784 ~ 6512110 (-) |
