G2044759



Basic Information


Item Value
gene id G2044759
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5564884 ~ 5565103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2339009
atgtacaccATGGCAATAAATCCATATTTAttttttaggcaggtctaaagaaccATTATGATATGAAGGAAATGCATTTCAGAAgatgagttggcctactgtatgttttcTGGCTACGCACCATACCATAGgatgtaggcttgttcatttagcagacaagatatgcttataagTCCCGTGCCATTATTTTAATCgcatagtaagaagaatataactGAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2339009 True 220 lncRNA 0.35 1 5564884 5565103

Neighbor


gene id symbol gene type direction distance location
LOC110507053 rnf26 coding upstream 53136 5505817 ~ 5511748 (+)
cbl cbl coding upstream 125820 5375556 ~ 5514824 (+)
LOC110507051 LOC106612471 coding upstream 233961 4879928 ~ 5330923 (+)
LOC118944797 NA coding upstream 253878 5310954 ~ 5311006 (+)
LOC110507382 NA coding upstream 706296 4790174 ~ 4858588 (+)
LOC110507391 arcn1 coding downstream 176159 5741262 ~ 5751139 (+)
LOC110507055 lxn coding downstream 191504 5756607 ~ 5764256 (+)
LOC110507392 itpkc coding downstream 204509 5769612 ~ 5794438 (+)
snrpa snrpa coding downstream 233510 5798613 ~ 5801513 (+)
LOC110507396 LOC106612485 coding downstream 257543 5822646 ~ 5870186 (+)
G2044758 kmt2a non-coding upstream 350 5564294 ~ 5564534 (+)
G2044757 NA non-coding upstream 1352 5563286 ~ 5563532 (+)
G2044756 NA non-coding upstream 3471 5561207 ~ 5561413 (+)
G2044754 NA non-coding upstream 7584 5556957 ~ 5557300 (+)
G2044753 NA non-coding upstream 9960 5554713 ~ 5554924 (+)
G2044763 NA non-coding downstream 1659 5566762 ~ 5567318 (+)
G2044764 NA non-coding downstream 2491 5567594 ~ 5567828 (+)
G2044765 NA non-coding downstream 10081 5575184 ~ 5575401 (+)
G2044771 NA non-coding downstream 13813 5578916 ~ 5579126 (+)
G2044791 NA non-coding downstream 44717 5609820 ~ 5610092 (+)
LOC110507374 spa17 other upstream 872012 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1158758 4405458 ~ 4406126 (+)
G2040882 NA other upstream 2725957 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 2749543 2813649 ~ 2815411 (+)
G2040863 NA other upstream 2762883 2799781 ~ 2802001 (+)
LOC110507397 sfr16 other downstream 326744 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 332414 5897208 ~ 5910058 (+)
G2045522 NA other downstream 929730 6494833 ~ 6495134 (+)
G2045655 NA other downstream 1127441 6692544 ~ 6693044 (+)
G2045665 NA other downstream 1154661 6719764 ~ 6720692 (+)

Expression



Co-expression Network