G2044792


Basic Information

Item Value
gene id G2044792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5611277 ~ 5613241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339042
TGGTGGTTCACCATGGTGCAAAGGTGGTTTCTGGCCCGATGCAAACTGCTTGGCGTCGGCGAGGGAGCTGAAAAGGGCAGCGAAGGGGTTGCGGGAGatgttttggttgttgttgccCTGGTCAGTCATCTCACTGGACCATAGACTCCATCAACAGGTGCTGGCACCAGCCTGGACAGAGAGGTACACTGTGGTATGGAACACTGGACTAGGTGAGTTCAAACAAATCTATAGAAGTTGTTTCAAGTGTGTCAGACTCAGCAAACAGGTTCGTGATTTCAAACGATCCACTCCTTATATGCTACTCTGTGTCAAGTAGtgccaaggagtggaatgataacTCAAACAGACTGGTACCTCTAGGCTAAACCCAGACGGTATGCATTTTTATTCAGGCCAGAGGAATAACAGAAACCCAATGTTCATTTGTGAAccacagactgactggttagctTATTGACAGGGCTCCACAGTGCTACCGTTTTTGGGGGCATAAGATGCCAAATATTTTGCTGTGCTACCTGGAATTTTGGTAGCACCAGTGCcccaagaaaaaaagaaaaaaatcccCCAGGTAATAAGTGTTGTATTGAATTCTTTGCTGTCCCTCGGCCCACAGCCTCAGTAGCATGCAAACGTGGTGGCACTGAAACAACAGCAGATAACGTGTATTTCAATTAGCTAGAAAAGCTTTCTTTCCTCTGCTTTGGTTCTCGCAC

Function

NR:

description
ubiquitin conjugation factor E4 A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339042 True 719 lncRNA 0.47 2 5611277 5613241

Neighbor

gene id symbol gene type direction distance location
LOC110507053 rnf26 coding upstream 99529 5505817 ~ 5511748 (+)
cbl cbl coding upstream 172213 5375556 ~ 5514824 (+)
LOC110507051 LOC106612471 coding upstream 280354 4879928 ~ 5330923 (+)
LOC118944797 NA coding upstream 300271 5310954 ~ 5311006 (+)
LOC110507382 NA coding upstream 752689 4790174 ~ 4858588 (+)
LOC110507391 arcn1 coding downstream 128021 5741262 ~ 5751139 (+)
LOC110507055 lxn coding downstream 143366 5756607 ~ 5764256 (+)
LOC110507392 itpkc coding downstream 156371 5769612 ~ 5794438 (+)
snrpa snrpa coding downstream 185372 5798613 ~ 5801513 (+)
LOC110507396 LOC106612485 coding downstream 209405 5822646 ~ 5870186 (+)
G2044791 NA non-coding upstream 1185 5609820 ~ 5610092 (+)
G2044771 NA non-coding upstream 32151 5578916 ~ 5579126 (+)
G2044765 NA non-coding upstream 35876 5575184 ~ 5575401 (+)
G2044764 NA non-coding upstream 43449 5567594 ~ 5567828 (+)
G2044763 NA non-coding upstream 43959 5566762 ~ 5567318 (+)
G2044927 NA non-coding downstream 2013 5615254 ~ 5616238 (+)
G2044931 NA non-coding downstream 4831 5618072 ~ 5618423 (+)
G2044950 NA non-coding downstream 23833 5637074 ~ 5637307 (+)
G2044952 NA non-coding downstream 24277 5637518 ~ 5637717 (+)
G2045111 NA non-coding downstream 159445 5772686 ~ 5773445 (+)
LOC110507374 spa17 other upstream 918405 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1205151 4405458 ~ 4406126 (+)
G2040882 NA other upstream 2772350 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 2795936 2813649 ~ 2815411 (+)
G2040863 NA other upstream 2809276 2799781 ~ 2802001 (+)
LOC110507397 sfr16 other downstream 278606 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 284276 5897208 ~ 5910058 (+)
G2045522 NA other downstream 881592 6494833 ~ 6495134 (+)
G2045655 NA other downstream 1079303 6692544 ~ 6693044 (+)
G2045665 NA other downstream 1106523 6719764 ~ 6720692 (+)

Expression


Co-expression Network