G2044931


Basic Information

Item Value
gene id G2044931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5618072 ~ 5618423 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339197
CAGTCTTTTGTCCTATGGCCCCCGGCACATATCTCACACattggaatctccctcctacatacTGCTACAACATTACCATAAACCTGGCACCTGAAACAACATAGTGGATTTGGAACAAAAGCTCTCGCGGGATAACTTATATAGCGCAGCATGACTTTATCCAACACTCGGCATCAGAAGTCAGGACTGACAGGGTTTCCTCAGTCGCACCAAACGGCGTGCATCACTACACTAGGGATCCCCAACTTCAATTGATCCACCTTAACACTCAAACCCCATCCCAGTCATCACTTCTTTCAATGGCGCTGGAGAGCAAAGCAGGACACCACTTTCGTCCCTCTGAGCAGCAGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339197 True 352 lncRNA 0.49 1 5618072 5618423

Neighbor

gene id symbol gene type direction distance location
LOC110507053 rnf26 coding upstream 106324 5505817 ~ 5511748 (+)
cbl cbl coding upstream 179008 5375556 ~ 5514824 (+)
LOC110507051 LOC106612471 coding upstream 287149 4879928 ~ 5330923 (+)
LOC118944797 NA coding upstream 307066 5310954 ~ 5311006 (+)
LOC110507382 NA coding upstream 759484 4790174 ~ 4858588 (+)
LOC110507391 arcn1 coding downstream 122839 5741262 ~ 5751139 (+)
LOC110507055 lxn coding downstream 138184 5756607 ~ 5764256 (+)
LOC110507392 itpkc coding downstream 151189 5769612 ~ 5794438 (+)
snrpa snrpa coding downstream 180190 5798613 ~ 5801513 (+)
LOC110507396 LOC106612485 coding downstream 204223 5822646 ~ 5870186 (+)
G2044927 NA non-coding upstream 1834 5615254 ~ 5616238 (+)
G2044792 NA non-coding upstream 4831 5611277 ~ 5613241 (+)
G2044791 NA non-coding upstream 7980 5609820 ~ 5610092 (+)
G2044771 NA non-coding upstream 38946 5578916 ~ 5579126 (+)
G2044765 NA non-coding upstream 42671 5575184 ~ 5575401 (+)
G2044950 NA non-coding downstream 18651 5637074 ~ 5637307 (+)
G2044952 NA non-coding downstream 19095 5637518 ~ 5637717 (+)
G2045111 NA non-coding downstream 154263 5772686 ~ 5773445 (+)
G2045114 NA non-coding downstream 157906 5776329 ~ 5776567 (+)
G2045106 NA non-coding downstream 177574 5795997 ~ 5796497 (+)
LOC110507374 spa17 other upstream 925200 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1211946 4405458 ~ 4406126 (+)
G2040882 NA other upstream 2779145 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 2802731 2813649 ~ 2815411 (+)
G2040863 NA other upstream 2816071 2799781 ~ 2802001 (+)
LOC110507397 sfr16 other downstream 273424 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 279094 5897208 ~ 5910058 (+)
G2045522 NA other downstream 876410 6494833 ~ 6495134 (+)
G2045655 NA other downstream 1074121 6692544 ~ 6693044 (+)
G2045665 NA other downstream 1101341 6719764 ~ 6720692 (+)

Expression


Co-expression Network