G2044952


Basic Information

Item Value
gene id G2044952
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5637518 ~ 5637717 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339218
CTAAAATAGAAAgctcacaccctgatctgtttcacctgtctttgtgcttgtctccacccccctccaggtgtttcccatcttccccattatccccagtgtatttatacctgtgttctctgtttgtctgttgccagttcgttttgtttcgtgaAACCTACCAGCAGCTGTTCCCCTGCGTCTGTCTGTTCTTGCGcctgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339218 True 200 lncRNA 0.48 1 5637518 5637717

Neighbor

gene id symbol gene type direction distance location
LOC110507053 rnf26 coding upstream 125770 5505817 ~ 5511748 (+)
cbl cbl coding upstream 198454 5375556 ~ 5514824 (+)
LOC110507051 LOC106612471 coding upstream 306595 4879928 ~ 5330923 (+)
LOC118944797 NA coding upstream 326512 5310954 ~ 5311006 (+)
LOC110507382 NA coding upstream 778930 4790174 ~ 4858588 (+)
LOC110507391 arcn1 coding downstream 103545 5741262 ~ 5751139 (+)
LOC110507055 lxn coding downstream 118890 5756607 ~ 5764256 (+)
LOC110507392 itpkc coding downstream 131895 5769612 ~ 5794438 (+)
snrpa snrpa coding downstream 160896 5798613 ~ 5801513 (+)
LOC110507396 LOC106612485 coding downstream 184929 5822646 ~ 5870186 (+)
G2044950 NA non-coding upstream 211 5637074 ~ 5637307 (+)
G2044931 NA non-coding upstream 19095 5618072 ~ 5618423 (+)
G2044927 NA non-coding upstream 21280 5615254 ~ 5616238 (+)
G2044792 NA non-coding upstream 24277 5611277 ~ 5613241 (+)
G2044791 NA non-coding upstream 27426 5609820 ~ 5610092 (+)
G2045111 NA non-coding downstream 134969 5772686 ~ 5773445 (+)
G2045114 NA non-coding downstream 138612 5776329 ~ 5776567 (+)
G2045106 NA non-coding downstream 158280 5795997 ~ 5796497 (+)
G2045124 NA non-coding downstream 176579 5814296 ~ 5814770 (+)
G2045130 NA non-coding downstream 182571 5820288 ~ 5820689 (+)
LOC110507374 spa17 other upstream 944646 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1231392 4405458 ~ 4406126 (+)
G2040882 NA other upstream 2798591 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 2822177 2813649 ~ 2815411 (+)
G2040863 NA other upstream 2835517 2799781 ~ 2802001 (+)
LOC110507397 sfr16 other downstream 254130 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 259800 5897208 ~ 5910058 (+)
G2045522 NA other downstream 857116 6494833 ~ 6495134 (+)
G2045655 NA other downstream 1054827 6692544 ~ 6693044 (+)
G2045665 NA other downstream 1082047 6719764 ~ 6720692 (+)

Expression


Co-expression Network