Gene
RNA
| Item | Value |
|---|---|
| gene id | G2045111 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 5772686 ~ 5773445 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2339388 | True | 760 | lncRNA | 0.40 | 1 | 5772686 | 5773445 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507055 | lxn | coding | upstream | 8430 | 5756607 ~ 5764256 (+) |
| LOC110507391 | arcn1 | coding | upstream | 21547 | 5741262 ~ 5751139 (+) |
| LOC110507053 | rnf26 | coding | upstream | 260938 | 5505817 ~ 5511748 (+) |
| cbl | cbl | coding | upstream | 333622 | 5375556 ~ 5514824 (+) |
| LOC110507051 | LOC106612471 | coding | upstream | 441763 | 4879928 ~ 5330923 (+) |
| snrpa | snrpa | coding | downstream | 25168 | 5798613 ~ 5801513 (+) |
| LOC110507396 | LOC106612485 | coding | downstream | 49201 | 5822646 ~ 5870186 (+) |
| LOC110507397 | sfr16 | coding | downstream | 101246 | 5874691 ~ 5896127 (+) |
| LOC110507398 | znf296 | coding | downstream | 123763 | 5897208 ~ 5910058 (+) |
| LOC110507399 | LOC106612489 | coding | downstream | 157323 | 5930768 ~ 5957003 (+) |
| G2044952 | NA | non-coding | upstream | 134969 | 5637518 ~ 5637717 (+) |
| G2044950 | NA | non-coding | upstream | 135379 | 5637074 ~ 5637307 (+) |
| G2044931 | NA | non-coding | upstream | 154263 | 5618072 ~ 5618423 (+) |
| G2044927 | NA | non-coding | upstream | 156448 | 5615254 ~ 5616238 (+) |
| G2044792 | NA | non-coding | upstream | 159445 | 5611277 ~ 5613241 (+) |
| G2045114 | NA | non-coding | downstream | 2884 | 5776329 ~ 5776567 (+) |
| G2045106 | NA | non-coding | downstream | 22552 | 5795997 ~ 5796497 (+) |
| G2045124 | NA | non-coding | downstream | 40851 | 5814296 ~ 5814770 (+) |
| G2045130 | NA | non-coding | downstream | 46843 | 5820288 ~ 5820689 (+) |
| G2045132 | NA | non-coding | downstream | 50237 | 5823682 ~ 5823882 (+) |
| LOC110507374 | spa17 | other | upstream | 1079814 | 4685868 ~ 4692872 (+) |
| G2043193 | NA | other | upstream | 1366560 | 4405458 ~ 4406126 (+) |
| G2040882 | NA | other | upstream | 2933759 | 2834096 ~ 2838927 (+) |
| LOC110507334 | LOC106612406 | other | upstream | 2957345 | 2813649 ~ 2815411 (+) |
| G2040863 | NA | other | upstream | 2970685 | 2799781 ~ 2802001 (+) |
| G2045522 | NA | other | downstream | 721388 | 6494833 ~ 6495134 (+) |
| G2045655 | NA | other | downstream | 919099 | 6692544 ~ 6693044 (+) |
| G2045665 | NA | other | downstream | 946319 | 6719764 ~ 6720692 (+) |
