G2045106


Basic Information

Item Value
gene id G2045106
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5795997 ~ 5796497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339383
TGAGGCCACTGCCCAGTGTGCTCTGTGTCCGGTGCGTTGGCATGGCTCATGGTTGAAATCCTCATCATATGGGATGAGGACGGGTTGTCCGTCAGCCAGGTGTTTCAGGACGGCTGTAGAGTTGTCTCCACTCATCCCTCCTGACAGGAGCTCAGCCCTGCACCCACACACCTCCTCTGCAAGCATGGCCATGTCACTAGCTgaatcagacacagacacac

Function

NR:

description
UPF0692 protein C19orf54 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339383 True 221 lncRNA 0.57 2 5795997 5796497

Neighbor

gene id symbol gene type direction distance location
LOC110507392 itpkc coding upstream 1559 5769612 ~ 5794438 (+)
LOC110507055 lxn coding upstream 31741 5756607 ~ 5764256 (+)
LOC110507391 arcn1 coding upstream 44858 5741262 ~ 5751139 (+)
LOC110507053 rnf26 coding upstream 284249 5505817 ~ 5511748 (+)
cbl cbl coding upstream 356933 5375556 ~ 5514824 (+)
snrpa snrpa coding downstream 2116 5798613 ~ 5801513 (+)
LOC110507396 LOC106612485 coding downstream 26149 5822646 ~ 5870186 (+)
LOC110507397 sfr16 coding downstream 78194 5874691 ~ 5896127 (+)
LOC110507398 znf296 coding downstream 100711 5897208 ~ 5910058 (+)
LOC110507399 LOC106612489 coding downstream 134271 5930768 ~ 5957003 (+)
G2045114 NA non-coding upstream 19430 5776329 ~ 5776567 (+)
G2045111 NA non-coding upstream 22552 5772686 ~ 5773445 (+)
G2044952 NA non-coding upstream 158280 5637518 ~ 5637717 (+)
G2044950 NA non-coding upstream 158690 5637074 ~ 5637307 (+)
G2044931 NA non-coding upstream 177574 5618072 ~ 5618423 (+)
G2045124 NA non-coding downstream 17799 5814296 ~ 5814770 (+)
G2045130 NA non-coding downstream 23791 5820288 ~ 5820689 (+)
G2045132 NA non-coding downstream 27185 5823682 ~ 5823882 (+)
G2045133 NA non-coding downstream 29039 5825536 ~ 5825771 (+)
G2045140 NA non-coding downstream 51355 5847852 ~ 5848596 (+)
LOC110507374 spa17 other upstream 1103125 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1389871 4405458 ~ 4406126 (+)
G2040882 NA other upstream 2957070 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 2980656 2813649 ~ 2815411 (+)
G2040863 NA other upstream 2993996 2799781 ~ 2802001 (+)
G2045522 NA other downstream 698336 6494833 ~ 6495134 (+)
G2045655 NA other downstream 896047 6692544 ~ 6693044 (+)
G2045665 NA other downstream 923267 6719764 ~ 6720692 (+)

Expression


Co-expression Network