G2045187


Basic Information

Item Value
gene id G2045187
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5802418 ~ 5802814 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339500
ATGTCACCGGGAGGGATCAGACAATGAAGTTGGAAGTCTCATCCAGTTGACTACATAAAAAAATGGTGGAAGCTCTCAATGGCGCTGCCCCATGTAAATAGAGCCTTTCGGCCATATGAGGCCTTGATCATTCTCTAtaggctgatccctcctgatgacctggatggaatcatgtgatccttccataacccataggaagtcccacccaattgactacttcaaaatggtgaatgtcctcaatggcactgcccttGCTGAAACTGACTTTTGGGCACAAGAGTCCTCTATCATTCAATGTGGTTAGACACTAGACACGCCATGGAAAACACTGCCTTCATCGGGGTGTTAATCAAAACCATCGTTGTGGTTTTGATACGGAAACACTGATTCAGTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339500 True 397 lncRNA 0.45 1 5802418 5802814

Neighbor

gene id symbol gene type direction distance location
c27h19orf54 clg01h19orf54 coding downstream 3926 5795135 ~ 5798492 (-)
LOC118944669 gfm1 coding downstream 35586 5759611 ~ 5766832 (-)
LOC110507390 LOC106612480 coding downstream 68053 5720390 ~ 5734365 (-)
LOC110507389 LOC105011778 coding downstream 92329 5679726 ~ 5710089 (-)
LOC110507260 nlrx1 coding downstream 165520 5635480 ~ 5636898 (-)
LOC110507406 map3k10 coding upstream 265610 6068424 ~ 6105009 (-)
LOC110507409 LOC106612510 coding upstream 420113 6222927 ~ 6224524 (-)
LOC110507410 LOC106612495 coding upstream 425299 6228113 ~ 6235871 (-)
LOC110507423 NA coding upstream 528463 6331277 ~ 6334277 (-)
LOC110507420 mrpl28 coding upstream 546330 6349144 ~ 6351899 (-)
G2045090 NA non-coding downstream 48376 5753656 ~ 5754042 (-)
G2045088 NA non-coding downstream 49638 5752548 ~ 5752780 (-)
G2045023 NA non-coding downstream 150825 5651207 ~ 5651593 (-)
G2045021 NA non-coding downstream 155628 5646480 ~ 5646790 (-)
G2044951 NA non-coding downstream 165111 5637074 ~ 5637307 (-)
G2045188 NA non-coding upstream 64 5802878 ~ 5803096 (-)
G2045191 NA non-coding upstream 3362 5806176 ~ 5806656 (-)
G2045193 NA non-coding upstream 5572 5808386 ~ 5808676 (-)
G2045197 NA non-coding upstream 12157 5814971 ~ 5815223 (-)
G2045202 NA non-coding upstream 19874 5822688 ~ 5823546 (-)
kmt2a kmt2a other downstream 260785 5531877 ~ 5586139 (-)
G2043518 NA other downstream 1387995 4414065 ~ 4414423 (-)
G2043483 NA other downstream 1422989 4378934 ~ 4379429 (-)
G2043460 NA other downstream 1454009 4343599 ~ 4348409 (-)
LOC110507356 LOC106580682 other downstream 2260665 3539029 ~ 3718487 (-)
G2045223 LOC106612485 other upstream 65761 5868575 ~ 5870139 (-)
LOC110507421 gemin7 other upstream 686908 6489704 ~ 6491119 (-)
LOC110507418 NA other upstream 699601 6501784 ~ 6512110 (-)
LOC110507058 egln2 other upstream 1189569 6992367 ~ 7028249 (-)

Expression


Co-expression Network