G2045124


Basic Information

Item Value
gene id G2045124
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5814296 ~ 5814770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339401
ATTGCTAGTCAAGAAGGAGCACCTTCCCCTCTCCAACTGGGTTTAAGAAGGGAGAGGCCTGTACCATCAACTGTATCCAGTGCAAACAAGGGCCTCATGTTGTTGACTTCTACTGTTCCCTGAATCATTCTCTTTAGGTCAGCTCTACAGTGTACACAAAATGCTTATTCTTCTGCAGTTTTCTCAAGCCTTTCCACACTCCCTTATTTTGCCCTGAGAAAGCGCTGACCTTAGCTGCTGGggcgctgtgtctgtgtgtgtgtgtgtgtgtgtgtttgtcagtgtccCATGCTCTTGGCGACATGCCTAATGACTCACCATTCACTACACTGGGACCTTTCAGCTGGGGGAACTGAGGCAACTTATCCGCCATCCGCGTGGGACATCTCCAAGCACGTCtacgtatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339401 True 475 lncRNA 0.49 1 5814296 5814770

Neighbor

gene id symbol gene type direction distance location
snrpa snrpa coding upstream 12783 5798613 ~ 5801513 (+)
LOC110507392 itpkc coding upstream 19858 5769612 ~ 5794438 (+)
LOC110507055 lxn coding upstream 50040 5756607 ~ 5764256 (+)
LOC110507391 arcn1 coding upstream 63157 5741262 ~ 5751139 (+)
LOC110507053 rnf26 coding upstream 302548 5505817 ~ 5511748 (+)
LOC110507396 LOC106612485 coding downstream 7876 5822646 ~ 5870186 (+)
LOC110507397 sfr16 coding downstream 59921 5874691 ~ 5896127 (+)
LOC110507398 znf296 coding downstream 82438 5897208 ~ 5910058 (+)
LOC110507399 LOC106612489 coding downstream 115998 5930768 ~ 5957003 (+)
LOC110507400 LOC106612489 coding downstream 145227 5959997 ~ 5993183 (+)
G2045106 NA non-coding upstream 17799 5795997 ~ 5796497 (+)
G2045114 NA non-coding upstream 37729 5776329 ~ 5776567 (+)
G2045111 NA non-coding upstream 40851 5772686 ~ 5773445 (+)
G2044952 NA non-coding upstream 176579 5637518 ~ 5637717 (+)
G2044950 NA non-coding upstream 176989 5637074 ~ 5637307 (+)
G2045130 NA non-coding downstream 5518 5820288 ~ 5820689 (+)
G2045132 NA non-coding downstream 8912 5823682 ~ 5823882 (+)
G2045133 NA non-coding downstream 10766 5825536 ~ 5825771 (+)
G2045140 NA non-coding downstream 33082 5847852 ~ 5848596 (+)
G2045268 NA non-coding downstream 121569 5936339 ~ 5936640 (+)
LOC110507374 spa17 other upstream 1121424 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1408170 4405458 ~ 4406126 (+)
G2040882 NA other upstream 2975369 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 2998955 2813649 ~ 2815411 (+)
G2040863 NA other upstream 3012295 2799781 ~ 2802001 (+)
G2045522 NA other downstream 680063 6494833 ~ 6495134 (+)
G2045655 NA other downstream 877774 6692544 ~ 6693044 (+)
G2045665 NA other downstream 904994 6719764 ~ 6720692 (+)

Expression


Co-expression Network