G2045130


Basic Information

Item Value
gene id G2045130
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5820288 ~ 5820689 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339413
TAGCACAGCATGAACGCCAAAATACTTTGCTCAGCCACCGGTATGTCCACTCTCAATGGCAAGGGGTCCCTTCAAACTCAAACTCGATCTAACAGACAAACTTTAGGATATTTTTTTCTCGGCTTTGTTTTGCAGACAGGCCTCATTCTCCACTACCATAATACGTGGTCCCCTAATTGCGCGGAGGTAGTCCCATAGAAACTCTTTCAGTTCGCCGACCAGTTACTGACAGTGCAGGCTGTGACTGACAGCCTACTTAATTGGCACAGCAGCGCTTTGATCTATACCGGATTAACCGAGGCCGGAAACTAGGGTAAAGCACATTCAGTGGCGATTTTGGAATGTAGTAAATCTTGGCGGGGcaaactcaacaacaacaaaaatgtatgcatgccagcaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339413 True 402 lncRNA 0.47 1 5820288 5820689

Neighbor

gene id symbol gene type direction distance location
snrpa snrpa coding upstream 18775 5798613 ~ 5801513 (+)
LOC110507392 itpkc coding upstream 25850 5769612 ~ 5794438 (+)
LOC110507055 lxn coding upstream 56032 5756607 ~ 5764256 (+)
LOC110507391 arcn1 coding upstream 69149 5741262 ~ 5751139 (+)
LOC110507053 rnf26 coding upstream 308540 5505817 ~ 5511748 (+)
LOC110507396 LOC106612485 coding downstream 1957 5822646 ~ 5870186 (+)
LOC110507397 sfr16 coding downstream 54002 5874691 ~ 5896127 (+)
LOC110507398 znf296 coding downstream 76519 5897208 ~ 5910058 (+)
LOC110507399 LOC106612489 coding downstream 110079 5930768 ~ 5957003 (+)
LOC110507400 LOC106612489 coding downstream 139308 5959997 ~ 5993183 (+)
G2045124 NA non-coding upstream 5518 5814296 ~ 5814770 (+)
G2045106 NA non-coding upstream 23791 5795997 ~ 5796497 (+)
G2045114 NA non-coding upstream 43721 5776329 ~ 5776567 (+)
G2045111 NA non-coding upstream 46843 5772686 ~ 5773445 (+)
G2044952 NA non-coding upstream 182571 5637518 ~ 5637717 (+)
G2045132 NA non-coding downstream 2993 5823682 ~ 5823882 (+)
G2045133 NA non-coding downstream 4847 5825536 ~ 5825771 (+)
G2045140 NA non-coding downstream 27163 5847852 ~ 5848596 (+)
G2045268 NA non-coding downstream 115650 5936339 ~ 5936640 (+)
G2045272 NA non-coding downstream 130362 5951051 ~ 5951352 (+)
LOC110507374 spa17 other upstream 1127416 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1414162 4405458 ~ 4406126 (+)
G2040882 NA other upstream 2981361 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 3004947 2813649 ~ 2815411 (+)
G2040863 NA other upstream 3018287 2799781 ~ 2802001 (+)
G2045522 NA other downstream 674144 6494833 ~ 6495134 (+)
G2045655 NA other downstream 871855 6692544 ~ 6693044 (+)
G2045665 NA other downstream 899075 6719764 ~ 6720692 (+)

Expression


Co-expression Network