G2045132


Basic Information

Item Value
gene id G2045132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5823682 ~ 5823882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339415
CTTCACGTCTTTACCAAAGCATGGTCTTTGGTTACACCATTTTTTTGTTATTGGGATTCTAAGCCTATTACACTGTAATTGCTTTGCTTTCCCGTTGAAAAGGGGCTAGACGACCCGTCCGCGAAGTGAATTGTTTGAACCAGAActgcagagggaagtgttcagAGTACAGTCTCCTATAACGGCTATAACGGTGTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339415 True 201 lncRNA 0.43 1 5823682 5823882

Neighbor

gene id symbol gene type direction distance location
snrpa snrpa coding upstream 22169 5798613 ~ 5801513 (+)
LOC110507392 itpkc coding upstream 29244 5769612 ~ 5794438 (+)
LOC110507055 lxn coding upstream 59426 5756607 ~ 5764256 (+)
LOC110507391 arcn1 coding upstream 72543 5741262 ~ 5751139 (+)
LOC110507053 rnf26 coding upstream 311934 5505817 ~ 5511748 (+)
LOC110507397 sfr16 coding downstream 50809 5874691 ~ 5896127 (+)
LOC110507398 znf296 coding downstream 73326 5897208 ~ 5910058 (+)
LOC110507399 LOC106612489 coding downstream 106886 5930768 ~ 5957003 (+)
LOC110507400 LOC106612489 coding downstream 136115 5959997 ~ 5993183 (+)
LOC110507403 fosb coding downstream 178833 6002715 ~ 6007384 (+)
G2045130 NA non-coding upstream 2993 5820288 ~ 5820689 (+)
G2045124 NA non-coding upstream 8912 5814296 ~ 5814770 (+)
G2045106 NA non-coding upstream 27185 5795997 ~ 5796497 (+)
G2045114 NA non-coding upstream 47115 5776329 ~ 5776567 (+)
G2045111 NA non-coding upstream 50237 5772686 ~ 5773445 (+)
G2045133 NA non-coding downstream 1654 5825536 ~ 5825771 (+)
G2045140 NA non-coding downstream 23970 5847852 ~ 5848596 (+)
G2045268 NA non-coding downstream 112457 5936339 ~ 5936640 (+)
G2045272 NA non-coding downstream 127169 5951051 ~ 5951352 (+)
G2045273 NA non-coding downstream 127822 5951704 ~ 5953046 (+)
LOC110507374 spa17 other upstream 1130810 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1417556 4405458 ~ 4406126 (+)
G2040882 NA other upstream 2984755 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 3008341 2813649 ~ 2815411 (+)
G2040863 NA other upstream 3021681 2799781 ~ 2802001 (+)
G2045522 NA other downstream 670951 6494833 ~ 6495134 (+)
G2045655 NA other downstream 868662 6692544 ~ 6693044 (+)
G2045665 NA other downstream 895882 6719764 ~ 6720692 (+)

Expression


Co-expression Network