Gene
RNA
| Item | Value |
|---|---|
| gene id | G2045707 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 5937864 ~ 5938243 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| calpain-8-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2340098 | True | 380 | lncRNA | 0.50 | 1 | 5937864 | 5938243 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c27h19orf54 | clg01h19orf54 | coding | downstream | 139372 | 5795135 ~ 5798492 (-) |
| LOC118944669 | gfm1 | coding | downstream | 171032 | 5759611 ~ 5766832 (-) |
| LOC110507390 | LOC106612480 | coding | downstream | 203499 | 5720390 ~ 5734365 (-) |
| LOC110507389 | LOC105011778 | coding | downstream | 227775 | 5679726 ~ 5710089 (-) |
| LOC110507260 | nlrx1 | coding | downstream | 300966 | 5635480 ~ 5636898 (-) |
| LOC110507406 | map3k10 | coding | upstream | 130181 | 6068424 ~ 6105009 (-) |
| LOC110507409 | LOC106612510 | coding | upstream | 284684 | 6222927 ~ 6224524 (-) |
| LOC110507410 | LOC106612495 | coding | upstream | 289870 | 6228113 ~ 6235871 (-) |
| LOC110507423 | NA | coding | upstream | 393034 | 6331277 ~ 6334277 (-) |
| LOC110507420 | mrpl28 | coding | upstream | 410901 | 6349144 ~ 6351899 (-) |
| G2045235 | NA | non-coding | downstream | 32953 | 5897494 ~ 5904911 (-) |
| G2045227 | sfr16 | non-coding | downstream | 41754 | 5888375 ~ 5896110 (-) |
| G2045224 | NA | non-coding | downstream | 66778 | 5870872 ~ 5871086 (-) |
| G2045223 | LOC106612485 | non-coding | downstream | 67770 | 5868575 ~ 5870139 (-) |
| G2045204 | NA | non-coding | downstream | 112361 | 5825289 ~ 5825503 (-) |
| G2045709 | NA | non-coding | upstream | 2798 | 5941041 ~ 5941284 (-) |
| G2045712 | NA | non-coding | upstream | 6837 | 5945080 ~ 5946264 (-) |
| G2045713 | NA | non-coding | upstream | 9043 | 5947286 ~ 5947734 (-) |
| G2045717 | NA | non-coding | upstream | 10315 | 5948558 ~ 5948947 (-) |
| G2045718 | NA | non-coding | upstream | 10769 | 5949012 ~ 5949246 (-) |
| kmt2a | kmt2a | other | downstream | 396231 | 5531877 ~ 5586139 (-) |
| G2043518 | NA | other | downstream | 1523441 | 4414065 ~ 4414423 (-) |
| G2043483 | NA | other | downstream | 1558435 | 4378934 ~ 4379429 (-) |
| G2043460 | NA | other | downstream | 1589455 | 4343599 ~ 4348409 (-) |
| LOC110507421 | gemin7 | other | upstream | 551479 | 6489704 ~ 6491119 (-) |
| LOC110507418 | NA | other | upstream | 564172 | 6501784 ~ 6512110 (-) |
| LOC110507058 | egln2 | other | upstream | 1054140 | 6992367 ~ 7028249 (-) |
| LOC110507059 | dscaml1 | other | upstream | 1243842 | 7182085 ~ 7411701 (-) |
