G2045272


Basic Information

Item Value
gene id G2045272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5951051 ~ 5951352 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339614
ggtatataacagaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacacagactttcaactccctccaaagattttctatggggttgagatctggagactggctaggccactccaggaccttgaaatgcttcttacgaagccactccttccttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcatcttcaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339614 True 302 lncRNA 0.48 1 5951051 5951352

Neighbor

gene id symbol gene type direction distance location
LOC110507398 znf296 coding upstream 40993 5897208 ~ 5910058 (+)
LOC110507397 sfr16 coding upstream 54924 5874691 ~ 5896127 (+)
LOC110507396 LOC106612485 coding upstream 80865 5822646 ~ 5870186 (+)
snrpa snrpa coding upstream 149538 5798613 ~ 5801513 (+)
LOC110507392 itpkc coding upstream 156613 5769612 ~ 5794438 (+)
LOC110507400 LOC106612489 coding downstream 8645 5959997 ~ 5993183 (+)
LOC110507403 fosb coding downstream 51363 6002715 ~ 6007384 (+)
LOC110507404 cssa09h19orf47 coding downstream 61049 6012401 ~ 6021237 (+)
LOC110507405 LOC106612492 coding downstream 76811 6028163 ~ 6065070 (+)
LOC110507407 sipa1l3 coding downstream 161168 6112520 ~ 6207567 (+)
G2045268 NA non-coding upstream 14411 5936339 ~ 5936640 (+)
G2045140 NA non-coding upstream 102455 5847852 ~ 5848596 (+)
G2045133 NA non-coding upstream 125280 5825536 ~ 5825771 (+)
G2045132 NA non-coding upstream 127169 5823682 ~ 5823882 (+)
G2045130 NA non-coding upstream 130362 5820288 ~ 5820689 (+)
G2045273 NA non-coding downstream 352 5951704 ~ 5953046 (+)
LOC110507399 LOC106612489 non-coding downstream 3263 5930768 ~ 5957003 (+)
G2045277 NA non-coding downstream 56622 6007974 ~ 6011892 (+)
G2045391 NA non-coding downstream 273836 6225188 ~ 6226090 (+)
LOC110507411 tbcb non-coding downstream 289170 6240480 ~ 6246883 (+)
LOC110507374 spa17 other upstream 1258179 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1544925 4405458 ~ 4406126 (+)
G2040882 NA other upstream 3112124 2834096 ~ 2838927 (+)
G2045522 NA other downstream 543481 6494833 ~ 6495134 (+)
G2045655 NA other downstream 741192 6692544 ~ 6693044 (+)
G2045665 NA other downstream 768412 6719764 ~ 6720692 (+)
G2046345 NA other downstream 1294454 7245806 ~ 7251575 (+)
G2046384 LOC106612398 other downstream 1305279 7256631 ~ 7258230 (+)

Expression


Co-expression Network