G2045273


Basic Information

Item Value
gene id G2045273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 5951704 ~ 5953046 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339615
caggatttgagtccctggcggcgtagtgggttactgatggtaggctttgttactttggtcccagctctctgcaggtcattccctaggtccccccgtgtggttctgggatttttgctcaccgttcttgtgatcattttgaccccacggggtgagatcttgcgtggagccccagaccgagggagattatcagtggtcttgtatgtcttccatttcccaataattgctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttgaagtgtgactgtttgaggttgtggacaggtgtattttatactgataacaagttcaaacaggtgccattaatacaggtaacaagtggaggacagaggagcctcttaaagaagaagttacaggtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttattgtccaccataatttgcaaataaattcattaaaaatcatacaatgtgattttctggattttttttcttcattttgtctgtcatagttgatgtgtacctatgatgataattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatactttttttgccccactgtatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339615 True 713 lncRNA 0.43 2 5951704 5953046

Neighbor

gene id symbol gene type direction distance location
LOC110507398 znf296 coding upstream 41646 5897208 ~ 5910058 (+)
LOC110507397 sfr16 coding upstream 55577 5874691 ~ 5896127 (+)
LOC110507396 LOC106612485 coding upstream 81518 5822646 ~ 5870186 (+)
snrpa snrpa coding upstream 150191 5798613 ~ 5801513 (+)
LOC110507392 itpkc coding upstream 157266 5769612 ~ 5794438 (+)
LOC110507400 LOC106612489 coding downstream 6951 5959997 ~ 5993183 (+)
LOC110507403 fosb coding downstream 49669 6002715 ~ 6007384 (+)
LOC110507404 cssa09h19orf47 coding downstream 59355 6012401 ~ 6021237 (+)
LOC110507405 LOC106612492 coding downstream 75117 6028163 ~ 6065070 (+)
LOC110507407 sipa1l3 coding downstream 159474 6112520 ~ 6207567 (+)
G2045272 NA non-coding upstream 352 5951051 ~ 5951352 (+)
G2045268 NA non-coding upstream 15064 5936339 ~ 5936640 (+)
G2045140 NA non-coding upstream 103108 5847852 ~ 5848596 (+)
G2045133 NA non-coding upstream 125933 5825536 ~ 5825771 (+)
G2045132 NA non-coding upstream 127822 5823682 ~ 5823882 (+)
LOC110507399 LOC106612489 non-coding downstream 1569 5930768 ~ 5957003 (+)
G2045277 NA non-coding downstream 54928 6007974 ~ 6011892 (+)
G2045391 NA non-coding downstream 272142 6225188 ~ 6226090 (+)
LOC110507411 tbcb non-coding downstream 287476 6240480 ~ 6246883 (+)
G2045453 NA non-coding downstream 396800 6349846 ~ 6350342 (+)
LOC110507374 spa17 other upstream 1258832 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1545578 4405458 ~ 4406126 (+)
G2040882 NA other upstream 3112777 2834096 ~ 2838927 (+)
G2045522 NA other downstream 541787 6494833 ~ 6495134 (+)
G2045655 NA other downstream 739498 6692544 ~ 6693044 (+)
G2045665 NA other downstream 766718 6719764 ~ 6720692 (+)
G2046345 NA other downstream 1292760 7245806 ~ 7251575 (+)
G2046384 LOC106612398 other downstream 1303585 7256631 ~ 7258230 (+)

Expression


Co-expression Network