G2045715


Basic Information

Item Value
gene id G2045715
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 6062148 ~ 6066528 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2340106
TTACAACTTTATTTATAGTCTTCATTTACCAATCTACAGTGCATTCCCGGGCTAACAGTTCAATGTAACCAGTTATCATGTCCTCCAATGTTTTGGATTTGGAATATTGAACAGACGCTTCTAACCACAATGTACTCATCATCAAGTCCTACTCTCCGGTACAAGCAAACGAGGAAAAAGGAAAGGAAAACAGATTCGCGGAGTTCTTCGTTGCTGTAGCTCATAAAtaacttctactgttgtaactGGTTCGGTTCTCCAACGCCCACTTTCTTCAACGAGATCCACTGTCACTTTGTGGGGTTCACAAACTCTTAAGAGTTGGGTATGGACTTTCCCAAAAACAGGGGACAACAAATCCTACTTAacatctacacacagagacaccgtGACAGAGAGCCTGCGGTGTAGCTACACCAAACTCACTTCCCCCTTCACTTGCGTTCTCATCCATTGATAAAATTACTCAATAAGGTAAAGCTTTTAACAGCCATTCGTTTTTCTTTTCAGTTTCGTATTTTGTTCACAATTGTTTTCTTAAGCACAAAAAACGACTTTGACATTTGACAAACATGTACCTCAATGACATCaaaggaaagagaagaaaaacgGCCCGTAATTTACTTTCCCACTTTAGTTTGTGCTTTTGCCGTGTCTTTTCAGAACTAGACGGCTAAAGAGACgatgtctctctctatctatatttgCACAGACAGCACGTTGTAACATTATTCCCACAATAACTGGTCCAGGGTCATTCCTTTGTTTATCTCATAATGGGTCATGTTAGGGCAGGGGTGGGAAGAACTTAGCCCTGACCTGTTTTTATGTGTAGACAGTAACCATAGACACGGAGCGATAATGACTCAGCACACTGGGATAACAACAGGATGGTGGACGGATGCCTTGGAGATAGGACCATGGGGAGATTCCCTATAGGGCCATGTGGGAGTAGGCCCAGCTCAGCCAGCCGTAAGGACCAATACAACACTACTGCACAGTGGTGAGGTTGagagagtaagagacagagagatatacaatgagtgtacaaaacattaagaacacctgctctttccatgacgtagacGGAACCAGGTGAATCCGGGCGAAAGCTATagacgtcacttgttaaatccacttccaagtcggtgtagatgaaggggaggtgacaggttaaagaaggatttttaagccttgagataattgagacatggattgtgtatgcgtgccattcagagggtgaatgggcaagacaaaaaaatgtaagtgaacggggtttggtagtaggtgccaggaacaccggtttgtgtcaagaactgcaacgccgcTGGGTTTTTgaggctcaacagtttcctgtgtgtgtcaagaattggtccaccacccaaaggacatccagccaacttgacacggaactgagggaagcattggagtcaacacgggccagcatccctgtggaacgctttcgacaccttgtagagtccattccccgatgtttggtatactcagtgtatatttcatTGACAAtcccaattattattattacattttgtTGATGATGTTAATATTGTTAAATATATATCCATTTGCAAAGTAGGCGTGGCAATATGGACATTGaaacgtcatgccaataaagcaatttGAATTTAAATTGAGATATGGAGAGAAatctggagagaggggaagagaatgagaaccagagagagagaaatagagagcgcgagaaagaaagagagttctTGGTGCCTCTGGGTTTTTCCACGCCGTGTCTCTGTACCAAGGTGTAAACCTCCCCCGAACCTCTTCACAACGCTGCTTTAACATAATCCCATCTCCACAGTGTCAGAGTGACACTGCACTCCTGCTGTGTTACTGGTGCTGCTGGCCCATTTCCCTCTACAGTGGAGCGCGTCTCTGGATCCCACAAATTTGCTCCGGGCATCGCGCTGCTGCCTCTCCAGAGTCCCAttgacaccacaggaggttggtggcacctgagttggggaggacgggctcgtggtaatggctggagcagaatagtggaaaggtatcaaatacgtcaaaacacatggtttccaccgTTCCGGACATCATTatcagccgtcctcccctcaacagcctcctcttATTGATGCACTTTGGTCCCAATGTCCCTCATATTAGGCCACAGGCAAATGATGAGATCTGTTATCGTTTTGATCTTGTATTATCCACTCCTCTGAAGTCCTTTTGGGATTATTCTCCTCGCCTTGGCCAAGGCAGACCACTGCTGCTGACCTTCATTTCTTTCTGCATGGGACCATATAAGTCTCAGAAAATTACCCGATGCGAGACACAAGATACCGAGGTCCTTTTCAGGCTATGCCGCTGACTACTCCATTAACCCATTCTACGTTTGCAGGGAGCATAGAGGGTATTAGCGGGATACATTGAATAGGGGGAGCAACCTGCCCTGTTATAGAAAGCAATGAACCAGACATTATCCCCGACATCCAAAATGGCTTCCCCTTTGAGCCACACATTACCATGCAGGGGCTTGGCTTGCACATAGGGTGAAGGAAACTGGGTTACACGGTATTAGATGGCGGAATTAAGGTCAACTCAAACCTCTCCTTTAGAACAGGGCAGGTAAGTCTACGTATTTCTATAAATCCTAGAAACCCTTCAGGCTTTATCAGCATCACTGGGATTGGTATTTAGAAAGTATGCAGTGGTATGATGGTCtgtatgtgtaatatgtcattaTCTGGCCTTGCCCCAATCACAATCCTCCCTTGTCTTGGTCTACCACTACTGTTGTGTAATCTGCCTATGGAGACAGCCATTTTTGTACTCATTTATTTTCTGAACCGATTTCTTTGTTTGTCGCAACACTGATATCTATTAGAATATGCACAACAAAATTCGGAATCTCAAATGGCACACTCGGGTTGATGTTTTTAACTGACTGGGTTGAGATGGCTGATACACCTCAGACGGATACAGCATGTGGGATCGGATTCCCTGCACGAACACTGCCAAGAGTGTCTTGTGATGTCACTGACGCCTGGGAAGGTTCAGCATGAGTGATCAAGGGCCTGGAAGTAGATCTCAGAGTAAAAAAATCAGAGAACTCTGTGCAGCCAAGGGTGCTTGATGGAACCTCAGTTCCACTGGCTATtttccattgtgacatcattagctAGAAagcggagaggggtggggggtggcgGGGGGGGGTTAACAGtctgacaacacaacacattccagGGGGGATTGGACAACAGATTCAAGACACCGGTTCACaaaaacacacctgttaaacagAGGAACAGCGAGTCCGGTGGGAGTTAGTTTGTTCCTTAGAAAGAGGAAGGACACACATTTTGCTTCATAACAACCGATAGTCGTAAGTGCAATGAAAATCAAACAGGAGACAAAAAAATGATCAAAGGACAAATTACAAACACTTGAATTAGCCCTTGAATTTAAAAACCGTCCAGAAATAGAGACAAGGTACAACAAGCTGAAAACGAAAAAGAAGATTGATTGAACATGAGCGCAAAGGTCGGCTTGTCTGAAGACTATTTCGTATTAAAAAGACAGAGATGTAGCCTGCTAGCTAGCCTGATCAGTACTGTACTGGGGGGACAATCTCTCTCCGGGACAAGTCTGGGTCAGTGGCTTTCAGACCTCCCTCCATTGTGTCAGGGCAGGGGTCAGGGAGTACAGTTGAATTGGCCTAAGGTCTTGATATGTGTTACACCATTTCCTTTCTCCTAAACTCCTTCCCCTGCCCTCCCCTGGTCCCTTTCCCAACCCTGGACCTCTCCTCAGTCCTCACATCGAAAGAATAAATAAGAAATTCTActctattttacatttttttacaccTTCTCTAAAGTACGCAGTTTTCTTTGATCATATATTTTTTGAAGCAGTTTTTTTTTCATTCGGACAACCATGACTGTTTTGTAtgagtatagtatagtatttcCCTCTGCTTCGTTTTTTTCTTGGTTTGTCAGTCTGCATCTGGGGTACAGAACAACAgcgcctggggggggagaagagagggagagagacagggcttTTTCTGCCCTGTTCTTTTACATGGTTGAGGCGCATCGCTCGGGCCAGTCATCATTGGGACTGGGCTCcataaaggaggagaagaggtcagagaggagaggtgacGTAGGATGGGTCGTAGCATAGGCCATAGTGATAGAGAGGCCAAAAGGTCAAAGGTTAGCCAAGGGCCTCTTTGCCGCTCTCCCGCTCCCGCTGACCCTCCCTATTCATCTTCATTTCCGTCAACTGGATGTACCGCAGCACGTTTGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2340106 True 4321 lncRNA 0.45 3 6062148 6066528

Neighbor

gene id symbol gene type direction distance location
c27h19orf54 clg01h19orf54 coding downstream 263656 5795135 ~ 5798492 (-)
LOC118944669 gfm1 coding downstream 295316 5759611 ~ 5766832 (-)
LOC110507390 LOC106612480 coding downstream 327783 5720390 ~ 5734365 (-)
LOC110507389 LOC105011778 coding downstream 352059 5679726 ~ 5710089 (-)
LOC110507260 nlrx1 coding downstream 425250 5635480 ~ 5636898 (-)
LOC110507406 map3k10 coding upstream 1896 6068424 ~ 6105009 (-)
LOC110507409 LOC106612510 coding upstream 156399 6222927 ~ 6224524 (-)
LOC110507410 LOC106612495 coding upstream 161585 6228113 ~ 6235871 (-)
LOC110507423 NA coding upstream 264749 6331277 ~ 6334277 (-)
LOC110507420 mrpl28 coding upstream 282616 6349144 ~ 6351899 (-)
G2045725 NA non-coding downstream 100160 5961458 ~ 5961988 (-)
G2045723 NA non-coding downstream 108150 5953685 ~ 5953998 (-)
G2045719 NA non-coding downstream 112331 5949564 ~ 5949817 (-)
G2045718 NA non-coding downstream 112902 5949012 ~ 5949246 (-)
G2045717 NA non-coding downstream 113201 5948558 ~ 5948947 (-)
G2045869 NA non-coding upstream 158659 6225187 ~ 6225889 (-)
G2045879 NA non-coding upstream 178477 6245005 ~ 6246876 (-)
G2045878 NA non-coding upstream 196629 6263157 ~ 6265208 (-)
G2046000 NA non-coding upstream 429732 6496260 ~ 6496468 (-)
G2045223 LOC106612485 other downstream 192009 5868575 ~ 5870139 (-)
kmt2a kmt2a other downstream 520515 5531877 ~ 5586139 (-)
G2043518 NA other downstream 1647725 4414065 ~ 4414423 (-)
G2043483 NA other downstream 1682719 4378934 ~ 4379429 (-)
G2043460 NA other downstream 1713739 4343599 ~ 4348409 (-)
LOC110507421 gemin7 other upstream 423194 6489704 ~ 6491119 (-)
LOC110507418 NA other upstream 435887 6501784 ~ 6512110 (-)
LOC110507058 egln2 other upstream 925855 6992367 ~ 7028249 (-)
LOC110507059 dscaml1 other upstream 1115557 7182085 ~ 7411701 (-)

Expression


Co-expression Network