Gene
RNA
| Item | Value |
|---|---|
| gene id | G2045525 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 6498329 ~ 6498532 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2339905 | True | 204 | lncRNA | 0.54 | 1 | 6498329 | 6498532 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507414 | relb | coding | upstream | 156520 | 6334332 ~ 6341809 (+) |
| LOC110507416 | NA | coding | upstream | 173849 | 6295838 ~ 6324480 (+) |
| LOC110507412 | clptm1 | coding | upstream | 233110 | 6247615 ~ 6265219 (+) |
| LOC110507411 | tbcb | coding | upstream | 251446 | 6240480 ~ 6246883 (+) |
| qpctla | LOC105011981 | coding | upstream | 275307 | 6217939 ~ 6223022 (+) |
| LOC110507417 | NA | coding | downstream | 31223 | 6529755 ~ 6569243 (+) |
| calm3a | LOC107670363 | coding | downstream | 77897 | 6576429 ~ 6592527 (+) |
| rtn2a | NA | coding | downstream | 208132 | 6706664 ~ 6719264 (+) |
| rhoub | LOC106612375 | coding | downstream | 227137 | 6725669 ~ 6734192 (+) |
| rab4b | LOC106612374 | coding | downstream | 295387 | 6793919 ~ 6811036 (+) |
| G2045520 | NA | non-coding | upstream | 5906 | 6492094 ~ 6492423 (+) |
| G2045506 | NA | non-coding | upstream | 46095 | 6452032 ~ 6452234 (+) |
| G2045453 | NA | non-coding | upstream | 147987 | 6349846 ~ 6350342 (+) |
| G2045391 | NA | non-coding | upstream | 272239 | 6225188 ~ 6226090 (+) |
| G2045540 | NA | non-coding | downstream | 22067 | 6520599 ~ 6520820 (+) |
| G2045544 | NA | non-coding | downstream | 26404 | 6524936 ~ 6525170 (+) |
| G2045550 | NA | non-coding | downstream | 37150 | 6535682 ~ 6535889 (+) |
| G2045554 | NA | non-coding | downstream | 43792 | 6542324 ~ 6542602 (+) |
| G2045591 | NA | non-coding | downstream | 105088 | 6603620 ~ 6604157 (+) |
| G2045522 | NA | other | upstream | 3195 | 6494833 ~ 6495134 (+) |
| LOC110507398 | znf296 | other | upstream | 591090 | 5897208 ~ 5910058 (+) |
| LOC110507397 | sfr16 | other | upstream | 602216 | 5874691 ~ 5896127 (+) |
| LOC110507374 | spa17 | other | upstream | 1805457 | 4685868 ~ 4692872 (+) |
| G2043193 | NA | other | upstream | 2092203 | 4405458 ~ 4406126 (+) |
| G2045655 | NA | other | downstream | 194012 | 6692544 ~ 6693044 (+) |
| G2045665 | NA | other | downstream | 221232 | 6719764 ~ 6720692 (+) |
| G2046345 | NA | other | downstream | 747274 | 7245806 ~ 7251575 (+) |
| G2046384 | LOC106612398 | other | downstream | 758099 | 7256631 ~ 7258230 (+) |
| si:cabz01090165.1 | LOC106580728 | other | downstream | 2108961 | 8606550 ~ 8741534 (+) |
