G2045540


Basic Information

Item Value
gene id G2045540
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 6520599 ~ 6520820 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339920
aaattcttggtattctaactgcactgtccaattacagtgaaataataccatgctattgtttgaggagagtgcacaattttgaatatgaaaagttattaatcaacaaattaggcacatttgggcagtcttgatacaacattttgaacataaatacaatggttcattgtatcagtctaaaactttgcacatacactgatgccatctagtggccaatatctaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339920 True 222 lncRNA 0.32 1 6520599 6520820

Neighbor

gene id symbol gene type direction distance location
LOC110507414 relb coding upstream 178790 6334332 ~ 6341809 (+)
LOC110507416 NA coding upstream 196119 6295838 ~ 6324480 (+)
LOC110507412 clptm1 coding upstream 255380 6247615 ~ 6265219 (+)
LOC110507411 tbcb coding upstream 273716 6240480 ~ 6246883 (+)
qpctla LOC105011981 coding upstream 297577 6217939 ~ 6223022 (+)
LOC110507417 NA coding downstream 8935 6529755 ~ 6569243 (+)
calm3a LOC107670363 coding downstream 55609 6576429 ~ 6592527 (+)
rtn2a NA coding downstream 185844 6706664 ~ 6719264 (+)
rhoub LOC106612375 coding downstream 204849 6725669 ~ 6734192 (+)
rab4b LOC106612374 coding downstream 273099 6793919 ~ 6811036 (+)
G2045525 NA non-coding upstream 22067 6498329 ~ 6498532 (+)
G2045520 NA non-coding upstream 28176 6492094 ~ 6492423 (+)
G2045506 NA non-coding upstream 68365 6452032 ~ 6452234 (+)
G2045453 NA non-coding upstream 170257 6349846 ~ 6350342 (+)
G2045544 NA non-coding downstream 4116 6524936 ~ 6525170 (+)
G2045550 NA non-coding downstream 14862 6535682 ~ 6535889 (+)
G2045554 NA non-coding downstream 21504 6542324 ~ 6542602 (+)
G2045591 NA non-coding downstream 82800 6603620 ~ 6604157 (+)
G2045598 NA non-coding downstream 96981 6617801 ~ 6621645 (+)
G2045522 NA other upstream 25465 6494833 ~ 6495134 (+)
LOC110507398 znf296 other upstream 613360 5897208 ~ 5910058 (+)
LOC110507397 sfr16 other upstream 624486 5874691 ~ 5896127 (+)
LOC110507374 spa17 other upstream 1827727 4685868 ~ 4692872 (+)
G2043193 NA other upstream 2114473 4405458 ~ 4406126 (+)
G2045655 NA other downstream 171724 6692544 ~ 6693044 (+)
G2045665 NA other downstream 198944 6719764 ~ 6720692 (+)
G2046345 NA other downstream 724986 7245806 ~ 7251575 (+)
G2046384 LOC106612398 other downstream 735811 7256631 ~ 7258230 (+)
si:cabz01090165.1 LOC106580728 other downstream 2086673 8606550 ~ 8741534 (+)

Expression


Co-expression Network