G2045544


Basic Information

Item Value
gene id G2045544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 6524936 ~ 6525170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339924
aaccagacctTATGATATAAATGTATTTACAGACAGacgggcacactccaacaatcagacatcatttacaaacgcaGTACACAGATCAGAAGCAGTAAGGATGATAACGCATTATATTGTTtggtgcgtgaattggaccataatTTTGTCCTGCctcagcattcaaaatgtaatgagtactttttggtgtcagggaaaatgtatgggagtaaaaagtacatattttctttaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339924 True 235 lncRNA 0.37 1 6524936 6525170

Neighbor

gene id symbol gene type direction distance location
LOC110507414 relb coding upstream 183127 6334332 ~ 6341809 (+)
LOC110507416 NA coding upstream 200456 6295838 ~ 6324480 (+)
LOC110507412 clptm1 coding upstream 259717 6247615 ~ 6265219 (+)
LOC110507411 tbcb coding upstream 278053 6240480 ~ 6246883 (+)
qpctla LOC105011981 coding upstream 301914 6217939 ~ 6223022 (+)
LOC110507417 NA coding downstream 4585 6529755 ~ 6569243 (+)
calm3a LOC107670363 coding downstream 51259 6576429 ~ 6592527 (+)
rtn2a NA coding downstream 181494 6706664 ~ 6719264 (+)
rhoub LOC106612375 coding downstream 200499 6725669 ~ 6734192 (+)
rab4b LOC106612374 coding downstream 268749 6793919 ~ 6811036 (+)
G2045540 NA non-coding upstream 4116 6520599 ~ 6520820 (+)
G2045525 NA non-coding upstream 26404 6498329 ~ 6498532 (+)
G2045520 NA non-coding upstream 32513 6492094 ~ 6492423 (+)
G2045506 NA non-coding upstream 72702 6452032 ~ 6452234 (+)
G2045453 NA non-coding upstream 174594 6349846 ~ 6350342 (+)
G2045550 NA non-coding downstream 10512 6535682 ~ 6535889 (+)
G2045554 NA non-coding downstream 17154 6542324 ~ 6542602 (+)
G2045591 NA non-coding downstream 78450 6603620 ~ 6604157 (+)
G2045598 NA non-coding downstream 92631 6617801 ~ 6621645 (+)
G2045651 NA non-coding downstream 162042 6687212 ~ 6689091 (+)
G2045522 NA other upstream 29802 6494833 ~ 6495134 (+)
LOC110507398 znf296 other upstream 617697 5897208 ~ 5910058 (+)
LOC110507397 sfr16 other upstream 628823 5874691 ~ 5896127 (+)
LOC110507374 spa17 other upstream 1832064 4685868 ~ 4692872 (+)
G2043193 NA other upstream 2118810 4405458 ~ 4406126 (+)
G2045655 NA other downstream 167374 6692544 ~ 6693044 (+)
G2045665 NA other downstream 194594 6719764 ~ 6720692 (+)
G2046345 NA other downstream 720636 7245806 ~ 7251575 (+)
G2046384 LOC106612398 other downstream 731461 7256631 ~ 7258230 (+)
si:cabz01090165.1 LOC106580728 other downstream 2082323 8606550 ~ 8741534 (+)

Expression


Co-expression Network