G2045554


Basic Information

Item Value
gene id G2045554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 6542324 ~ 6542602 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2339934
gatatatatggacagaattaatcgaataaaaggaccatttgtgatgtttatgggacatattggagtgccaacagaagaagctcctcaaaggtaaggcatgttttatatttttatttctgcgttttgtgtcccgcctgcagggttgaaatgttttctctcttttgtttatggaggcgctatcctcagataatcgtttgctttcgccgaaaagcctttttgaaatctgacatgttggctggattcacaacacgtgtagctttaatttggtatcttacatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2339934 True 279 lncRNA 0.38 1 6542324 6542602

Neighbor

gene id symbol gene type direction distance location
LOC110507414 relb coding upstream 200515 6334332 ~ 6341809 (+)
LOC110507416 NA coding upstream 217844 6295838 ~ 6324480 (+)
LOC110507412 clptm1 coding upstream 277105 6247615 ~ 6265219 (+)
LOC110507411 tbcb coding upstream 295441 6240480 ~ 6246883 (+)
qpctla LOC105011981 coding upstream 319302 6217939 ~ 6223022 (+)
calm3a LOC107670363 coding downstream 33827 6576429 ~ 6592527 (+)
rtn2a NA coding downstream 164062 6706664 ~ 6719264 (+)
rhoub LOC106612375 coding downstream 183067 6725669 ~ 6734192 (+)
rab4b LOC106612374 coding downstream 251317 6793919 ~ 6811036 (+)
arhgap35a LOC106612372 coding downstream 270247 6812849 ~ 6907589 (+)
G2045550 NA non-coding upstream 6435 6535682 ~ 6535889 (+)
G2045544 NA non-coding upstream 17154 6524936 ~ 6525170 (+)
G2045540 NA non-coding upstream 21504 6520599 ~ 6520820 (+)
G2045525 NA non-coding upstream 43792 6498329 ~ 6498532 (+)
G2045520 NA non-coding upstream 49901 6492094 ~ 6492423 (+)
G2045591 NA non-coding downstream 61018 6603620 ~ 6604157 (+)
G2045598 NA non-coding downstream 75199 6617801 ~ 6621645 (+)
G2045651 NA non-coding downstream 144610 6687212 ~ 6689091 (+)
G2045652 NA non-coding downstream 146690 6689292 ~ 6689562 (+)
G2045653 NA non-coding downstream 147123 6689725 ~ 6689988 (+)
G2045522 NA other upstream 47190 6494833 ~ 6495134 (+)
LOC110507398 znf296 other upstream 635085 5897208 ~ 5910058 (+)
LOC110507397 sfr16 other upstream 646211 5874691 ~ 5896127 (+)
LOC110507374 spa17 other upstream 1849452 4685868 ~ 4692872 (+)
G2043193 NA other upstream 2136198 4405458 ~ 4406126 (+)
G2045655 NA other downstream 149942 6692544 ~ 6693044 (+)
G2045665 NA other downstream 177162 6719764 ~ 6720692 (+)
G2046345 NA other downstream 703204 7245806 ~ 7251575 (+)
G2046384 LOC106612398 other downstream 714029 7256631 ~ 7258230 (+)
si:cabz01090165.1 LOC106580728 other downstream 2064891 8606550 ~ 8741534 (+)

Expression


Co-expression Network