Gene
RNA
| Item | Value |
|---|---|
| gene id | G2045655 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 6692544 ~ 6693044 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 4F2 cell-surface antigen heavy chain-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2340040 | True | 501 | TUCP | 0.54 | 1 | 6692544 | 6693044 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| calm3a | LOC107670363 | coding | upstream | 100017 | 6576429 ~ 6592527 (+) |
| LOC110507417 | NA | coding | upstream | 123301 | 6529755 ~ 6569243 (+) |
| LOC110507414 | relb | coding | upstream | 350735 | 6334332 ~ 6341809 (+) |
| LOC110507416 | NA | coding | upstream | 368064 | 6295838 ~ 6324480 (+) |
| LOC110507412 | clptm1 | coding | upstream | 427325 | 6247615 ~ 6265219 (+) |
| rtn2a | NA | coding | downstream | 13620 | 6706664 ~ 6719264 (+) |
| rhoub | LOC106612375 | coding | downstream | 32625 | 6725669 ~ 6734192 (+) |
| rab4b | LOC106612374 | coding | downstream | 100875 | 6793919 ~ 6811036 (+) |
| arhgap35a | LOC106612372 | coding | downstream | 119805 | 6812849 ~ 6907589 (+) |
| LOC110507056 | npas1 | coding | downstream | 243865 | 6936909 ~ 6974629 (+) |
| G2045560 | NA | non-coding | upstream | 1159 | 6691075 ~ 6691385 (+) |
| G2045653 | NA | non-coding | upstream | 2556 | 6689725 ~ 6689988 (+) |
| G2045652 | NA | non-coding | upstream | 2982 | 6689292 ~ 6689562 (+) |
| G2045651 | NA | non-coding | upstream | 3453 | 6687212 ~ 6689091 (+) |
| G2045598 | NA | non-coding | upstream | 70899 | 6617801 ~ 6621645 (+) |
| G2045674 | NA | non-coding | downstream | 43397 | 6736441 ~ 6736706 (+) |
| G2045686 | NA | non-coding | downstream | 68529 | 6761573 ~ 6761981 (+) |
| G2045688 | NA | non-coding | downstream | 75178 | 6768222 ~ 6768535 (+) |
| G2045689 | NA | non-coding | downstream | 75642 | 6768686 ~ 6769032 (+) |
| G2045690 | NA | non-coding | downstream | 82616 | 6775660 ~ 6775938 (+) |
| G2045522 | NA | other | upstream | 197410 | 6494833 ~ 6495134 (+) |
| LOC110507398 | znf296 | other | upstream | 785305 | 5897208 ~ 5910058 (+) |
| LOC110507397 | sfr16 | other | upstream | 796431 | 5874691 ~ 5896127 (+) |
| LOC110507374 | spa17 | other | upstream | 1999672 | 4685868 ~ 4692872 (+) |
| G2043193 | NA | other | upstream | 2286418 | 4405458 ~ 4406126 (+) |
| G2045665 | NA | other | downstream | 26720 | 6719764 ~ 6720692 (+) |
| G2046345 | NA | other | downstream | 552762 | 7245806 ~ 7251575 (+) |
| G2046384 | LOC106612398 | other | downstream | 563587 | 7256631 ~ 7258230 (+) |
| si:cabz01090165.1 | LOC106580728 | other | downstream | 1914449 | 8606550 ~ 8741534 (+) |
| G2049339 | LOC100380674 | other | downstream | 2714581 | 9407625 ~ 9408571 (+) |
