Gene
RNA
| Item | Value |
|---|---|
| gene id | G2046706 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 6960323 ~ 6960625 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2341195 | True | 303 | lncRNA | 0.36 | 1 | 6960323 | 6960625 |
6,959,200
6,959,600
6,960,000
6,960,400
6,960,800
6,961,200
6,961,600
6,962,000
6,962,400
6,962,800
6,963,200
6,963,600
NC_048591.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ap2s1 | AP2S1 | coding | downstream | 143734 | 6811406 ~ 6816589 (-) |
| LOC118944637 | NA | coding | downstream | 200018 | 6757635 ~ 6760305 (-) |
| LOC110507428 | LOC106612376 | coding | downstream | 255790 | 6694165 ~ 6704533 (-) |
| LOC110507427 | NA | coding | downstream | 266303 | 6688521 ~ 6694030 (-) |
| ptgir | ptgir | coding | downstream | 288163 | 6610446 ~ 6672160 (-) |
| tmem160 | tmem160 | coding | upstream | 25015 | 6985640 ~ 6988182 (-) |
| LOC110507058 | egln2 | coding | upstream | 31742 | 6992367 ~ 7028249 (-) |
| LOC110507438 | LOC106612392 | coding | upstream | 142886 | 7103511 ~ 7108254 (-) |
| LOC110507441 | LOC106612399 | coding | upstream | 257995 | 7218620 ~ 7225752 (-) |
| LOC110507059 | dscaml1 | coding | upstream | 291176 | 7182085 ~ 7411701 (-) |
| G2046702 | npas1 | non-coding | downstream | 8823 | 6951115 ~ 6951500 (-) |
| G2046701 | NA | non-coding | downstream | 9291 | 6950801 ~ 6951032 (-) |
| G2046700 | NA | non-coding | downstream | 10351 | 6949718 ~ 6949972 (-) |
| G2046699 | NA | non-coding | downstream | 15634 | 6944335 ~ 6944689 (-) |
| G2046697 | NA | non-coding | downstream | 20711 | 6939404 ~ 6939612 (-) |
| G2046710 | npas1 | non-coding | upstream | 10126 | 6970751 ~ 6971927 (-) |
| G2046745 | NA | non-coding | upstream | 115348 | 7075973 ~ 7076190 (-) |
| G2046749 | NA | non-coding | upstream | 119918 | 7080543 ~ 7080758 (-) |
| G2046685 | slc1a5 | non-coding | upstream | 127716 | 7088341 ~ 7088966 (-) |
| G2046688 | slc1a5 | non-coding | upstream | 135880 | 7096505 ~ 7096808 (-) |
| LOC110507418 | NA | other | downstream | 452742 | 6501784 ~ 6512110 (-) |
| LOC110507421 | gemin7 | other | downstream | 469204 | 6489704 ~ 6491119 (-) |
| LOC110507410 | LOC106612495 | other | downstream | 724801 | 6228113 ~ 6235871 (-) |
| G2045223 | LOC106612485 | other | downstream | 1090184 | 5868575 ~ 5870139 (-) |
| kmt2a | kmt2a | other | downstream | 1418690 | 5531877 ~ 5586139 (-) |
| fxyd6 | fxyd6 | other | upstream | 482048 | 7442657 ~ 7468560 (-) |
| G2046935 | NA | other | upstream | 545094 | 7505719 ~ 7510925 (-) |
| LOC110507449 | LOC106580720 | other | upstream | 843258 | 7803655 ~ 7904639 (-) |
