Gene
RNA
| Item | Value |
|---|---|
| gene id | G2046310 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 7058748 ~ 7059518 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2340764 | True | 297 | lncRNA | 0.47 | 2 | 7058748 | 7059518 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507056 | npas1 | coding | upstream | 84119 | 6936909 ~ 6974629 (+) |
| arhgap35a | LOC106612372 | coding | upstream | 151159 | 6812849 ~ 6907589 (+) |
| rab4b | LOC106612374 | coding | upstream | 247712 | 6793919 ~ 6811036 (+) |
| rhoub | LOC106612375 | coding | upstream | 324556 | 6725669 ~ 6734192 (+) |
| rtn2a | NA | coding | upstream | 339484 | 6706664 ~ 6719264 (+) |
| LOC110507436 | slc1a5 | coding | downstream | 28530 | 7088048 ~ 7101257 (+) |
| LOC110507437 | strn4 | coding | downstream | 48447 | 7107965 ~ 7133262 (+) |
| LOC110507439 | prkd2 | coding | downstream | 76004 | 7135522 ~ 7183437 (+) |
| LOC110507440 | LOC106612400 | coding | downstream | 137932 | 7197450 ~ 7209528 (+) |
| LOC110507445 | LOC106612744 | coding | downstream | 438472 | 7497990 ~ 7502256 (+) |
| G2046245 | NA | non-coding | upstream | 80400 | 6966920 ~ 6978348 (+) |
| G2046229 | NA | non-coding | upstream | 123484 | 6934960 ~ 6935264 (+) |
| G2046226 | NA | non-coding | upstream | 128126 | 6930399 ~ 6930622 (+) |
| G2046225 | NA | non-coding | upstream | 129376 | 6929107 ~ 6929372 (+) |
| G2046224 | NA | non-coding | upstream | 129808 | 6928640 ~ 6928940 (+) |
| G2046325 | NA | non-coding | downstream | 25170 | 7084688 ~ 7085163 (+) |
| G2046332 | NA | non-coding | downstream | 37305 | 7096823 ~ 7097029 (+) |
| G2046345 | NA | non-coding | downstream | 186288 | 7245806 ~ 7251575 (+) |
| G2046463 | NA | non-coding | downstream | 362104 | 7421622 ~ 7421912 (+) |
| G2045665 | NA | other | upstream | 338056 | 6719764 ~ 6720692 (+) |
| G2045655 | NA | other | upstream | 365704 | 6692544 ~ 6693044 (+) |
| G2045522 | NA | other | upstream | 563614 | 6494833 ~ 6495134 (+) |
| LOC110507398 | znf296 | other | upstream | 1151509 | 5897208 ~ 5910058 (+) |
| LOC110507397 | sfr16 | other | upstream | 1162635 | 5874691 ~ 5896127 (+) |
| G2046384 | LOC106612398 | other | downstream | 197113 | 7256631 ~ 7258230 (+) |
| si:cabz01090165.1 | LOC106580728 | other | downstream | 1547975 | 8606550 ~ 8741534 (+) |
| G2049339 | LOC100380674 | other | downstream | 2348107 | 9407625 ~ 9408571 (+) |
| G2049657 | NA | other | downstream | 2728288 | 9787806 ~ 9788115 (+) |
