G2046325


Basic Information

Item Value
gene id G2046325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 7084688 ~ 7085163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2340779
tggctgcttttccttcactctgtggtccaactcatcccaagccatctcaattgggttgaggttgggtaattgtcgaggacaggtcatctgatgaagcactccatcactctccttcttggtcaaatagcccttacacagcctgtaggtgtgttgggtcattgtcctgttaaaaaacaaataacagtcccactaagcgcaaaccagatgggatggagtatcgctgcagaatgctgtggtagccatgctgattaagtgttccttgaatttgaaataaatcccagacagtgtcaccagcaaagcaccatcacacctcctccatgcttcatggtgggaaccacacatgcagagatcatctgttcacctactctgcgtctcacaaagacacggctgttggatccaataatgacacatttggactcatcatcaAATTTGGACttaattgctcgtgtttcttggcccaagcaagtctcttcttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2340779 True 476 lncRNA 0.46 1 7084688 7085163

Neighbor

gene id symbol gene type direction distance location
LOC110507056 npas1 coding upstream 110059 6936909 ~ 6974629 (+)
arhgap35a LOC106612372 coding upstream 177099 6812849 ~ 6907589 (+)
rab4b LOC106612374 coding upstream 273652 6793919 ~ 6811036 (+)
rhoub LOC106612375 coding upstream 350496 6725669 ~ 6734192 (+)
rtn2a NA coding upstream 365424 6706664 ~ 6719264 (+)
LOC110507436 slc1a5 coding downstream 2885 7088048 ~ 7101257 (+)
LOC110507437 strn4 coding downstream 22802 7107965 ~ 7133262 (+)
LOC110507439 prkd2 coding downstream 50359 7135522 ~ 7183437 (+)
LOC110507440 LOC106612400 coding downstream 112287 7197450 ~ 7209528 (+)
LOC110507445 LOC106612744 coding downstream 412827 7497990 ~ 7502256 (+)
G2046263 NA non-coding upstream 11717 7008556 ~ 7072971 (+)
G2046310 NA non-coding upstream 25170 7058748 ~ 7059518 (+)
G2046245 NA non-coding upstream 106340 6966920 ~ 6978348 (+)
G2046229 NA non-coding upstream 149424 6934960 ~ 6935264 (+)
G2046226 NA non-coding upstream 154066 6930399 ~ 6930622 (+)
G2046332 NA non-coding downstream 11660 7096823 ~ 7097029 (+)
G2046345 NA non-coding downstream 160643 7245806 ~ 7251575 (+)
G2046463 NA non-coding downstream 336459 7421622 ~ 7421912 (+)
G2046464 NA non-coding downstream 336849 7422012 ~ 7422225 (+)
G2045665 NA other upstream 363996 6719764 ~ 6720692 (+)
G2045655 NA other upstream 391644 6692544 ~ 6693044 (+)
G2045522 NA other upstream 589554 6494833 ~ 6495134 (+)
LOC110507398 znf296 other upstream 1177449 5897208 ~ 5910058 (+)
LOC110507397 sfr16 other upstream 1188575 5874691 ~ 5896127 (+)
G2046384 LOC106612398 other downstream 171468 7256631 ~ 7258230 (+)
si:cabz01090165.1 LOC106580728 other downstream 1522330 8606550 ~ 8741534 (+)
G2049339 LOC100380674 other downstream 2322462 9407625 ~ 9408571 (+)
G2049657 NA other downstream 2702643 9787806 ~ 9788115 (+)

Expression


Co-expression Network