G2046753



Basic Information


Item Value
gene id G2046753
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 7101878 ~ 7102114 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2341250
gtgctgctatggtgaccagcgagcagagAAGGCGATAGCCAGGGGCATGTCTGAAGTTCCATTAGAATGAATAGAAGTACATGTCTCTCCGTCAACACCTCATGGAAGCAGGACATAGCACCAGGTAGTCTGTGTAATATGTTCCTTCATGGGCATCGCCGTTAACTACAACCTGACAAACTTGTCTTGTCCGGAGGGCCTATTCGCAACCTGTCATAGtggatacactgagtgtac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2341250 True 237 lncRNA 0.49 1 7101878 7102114

Neighbor


gene id symbol gene type direction distance location
LOC110507058 egln2 coding downstream 73629 6992367 ~ 7028249 (-)
tmem160 tmem160 coding downstream 113696 6985640 ~ 6988182 (-)
ap2s1 AP2S1 coding downstream 285289 6811406 ~ 6816589 (-)
LOC118944637 NA coding downstream 341573 6757635 ~ 6760305 (-)
LOC110507428 LOC106612376 coding downstream 397345 6694165 ~ 6704533 (-)
LOC110507438 LOC106612392 coding upstream 1397 7103511 ~ 7108254 (-)
LOC110507441 LOC106612399 coding upstream 116506 7218620 ~ 7225752 (-)
LOC110507059 dscaml1 coding upstream 149687 7182085 ~ 7411701 (-)
LOC110507442 LOC106612730 coding upstream 334528 7436104 ~ 7442238 (-)
fxyd6 fxyd6 coding upstream 340543 7442657 ~ 7468560 (-)
G2046688 slc1a5 non-coding downstream 5070 7096505 ~ 7096808 (-)
G2046685 slc1a5 non-coding downstream 12912 7088341 ~ 7088966 (-)
G2046749 NA non-coding downstream 21120 7080543 ~ 7080758 (-)
G2046745 NA non-coding downstream 25688 7075973 ~ 7076190 (-)
G2046710 npas1 non-coding downstream 129951 6970751 ~ 6971927 (-)
G2046754 NA non-coding upstream 310 7102424 ~ 7102641 (-)
G2046785 NA non-coding upstream 49153 7151267 ~ 7152439 (-)
G2046775 NA non-coding upstream 147608 7249722 ~ 7250137 (-)
G2046922 NA non-coding upstream 320163 7422277 ~ 7422534 (-)
LOC110507418 NA other downstream 594297 6501784 ~ 6512110 (-)
LOC110507421 gemin7 other downstream 610759 6489704 ~ 6491119 (-)
LOC110507410 LOC106612495 other downstream 866356 6228113 ~ 6235871 (-)
G2045223 LOC106612485 other downstream 1231739 5868575 ~ 5870139 (-)
G2046935 NA other upstream 403605 7505719 ~ 7510925 (-)
LOC110507449 LOC106580720 other upstream 701769 7803655 ~ 7904639 (-)
LOC110507462 LOC106580732 other upstream 1745730 8839834 ~ 8852498 (-)

Expression



Co-expression Network