G2046785


Basic Information

Item Value
gene id G2046785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 7151267 ~ 7152439 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2341290
tttttccccccactgtatcaTCTGCCATTATCATCCTTCAATCTTACTCTTTTTATTATTCACCTTTCCCCCCCCTGTATCATCTGCCATTATCATCCTTCAATCTTACTCTTTTTATTATTCACCTTTCCCCCCCTGTATCATCTGCCATTATCATCCTTCAATCTTACTCTTTTTATTATTCACCTTTCCCCCCCTGTATCATCTGCCATTATCATCCTTCAATCTTACTCTTTTTATTATTcacctttccccccccTGTATCATCTGCCATTATCATCCTTCAATCTTACTATTTTTATTATTCACCTTTCCCCCCCTGTATGATCTGCCATTATCGTCATTCAATCCTACTCTTTTTATTATTCACCTTTTCCCCCCCACTGTATCATCTGCCATTATCATCCTTCAATCTTACTCTTTTTATTATTCACCTTTTTCCCCCCACTGGTGAGATGGATTCAACCATTTCAAAGGACATGGATATCTGGACACTTGTGGATACAGATAGTACCTTCTCCACACAGCAAAGCCGACACAGAGCGTTAACTCGCTAGCTGCTTATTCAGGCCTGCAATCTGAAGGCCACATACTGTCAGCCTAAGTACATGGCTGAGACTCCTGAATATCAGCCCCACAGGCTTGCGATGATAACCAAAGCTACTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2341290 True 668 lncRNA 0.41 4 7151267 7152439

Neighbor

gene id symbol gene type direction distance location
LOC110507438 LOC106612392 coding downstream 43526 7103511 ~ 7108254 (-)
LOC110507058 egln2 coding downstream 123018 6992367 ~ 7028249 (-)
tmem160 tmem160 coding downstream 163085 6985640 ~ 6988182 (-)
ap2s1 AP2S1 coding downstream 334678 6811406 ~ 6816589 (-)
LOC118944637 NA coding downstream 390962 6757635 ~ 6760305 (-)
LOC110507441 LOC106612399 coding upstream 66181 7218620 ~ 7225752 (-)
LOC110507059 dscaml1 coding upstream 99362 7182085 ~ 7411701 (-)
LOC110507442 LOC106612730 coding upstream 284203 7436104 ~ 7442238 (-)
fxyd6 fxyd6 coding upstream 290218 7442657 ~ 7468560 (-)
LOC110507060 LOC106612728 coding upstream 317694 7470133 ~ 7483382 (-)
G2046754 NA non-coding downstream 48626 7102424 ~ 7102641 (-)
G2046753 NA non-coding downstream 49153 7101878 ~ 7102114 (-)
G2046688 slc1a5 non-coding downstream 54459 7096505 ~ 7096808 (-)
G2046685 slc1a5 non-coding downstream 62301 7088341 ~ 7088966 (-)
G2046775 NA non-coding upstream 97283 7249722 ~ 7250137 (-)
G2046922 NA non-coding upstream 269838 7422277 ~ 7422534 (-)
G2046923 NA non-coding upstream 270198 7422637 ~ 7423184 (-)
G2046958 NA non-coding upstream 359882 7512321 ~ 7512723 (-)
LOC110507418 NA other downstream 643686 6501784 ~ 6512110 (-)
LOC110507421 gemin7 other downstream 660148 6489704 ~ 6491119 (-)
LOC110507410 LOC106612495 other downstream 915745 6228113 ~ 6235871 (-)
G2045223 LOC106612485 other downstream 1281128 5868575 ~ 5870139 (-)
G2046935 NA other upstream 353280 7505719 ~ 7510925 (-)
LOC110507449 LOC106580720 other upstream 651444 7803655 ~ 7904639 (-)
LOC110507462 LOC106580732 other upstream 1695405 8839834 ~ 8852498 (-)

Expression


Co-expression Network