G2046471


Basic Information

Item Value
gene id G2046471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 7429541 ~ 7431697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2340941
gtaccagtttggacacacctactcattcaagggttcttcaaagtagccaccctttgccttgatgacagctttgcacacacttggcattctctcaacgagGTAGTCTTCATGAggtcacctgtaatgcatttcaattagcaggtgtgccttgttaaaagttcatttgtggaatttctttccttcttaatgcgtctaacacatgaaggccagtcaatccggaaaagtGGCTTTCAGATAGCACTGTAATAATGCAATATCTTAGTAAATTGAAGAAGTAAACGGTGGAATTGAGCCCTGGGACTGATATGAAATTAGAGGCTGCCATCTGGTGTTTGGGTTAAAGATAAGCTCCTGGTGGACCAACAGATTGGCTGCCGGTGAAAGTGAGTTATACTTGTTGAACTCAGGCTGTAAGGGACACAGGTACGAATCATTGAATAAGATACGTTTTTGACGTTTATAATACGTTTATTATTTCTTAATTCGATAGTTTCAATAACACCAGTGAATTAAATGGTAAGGTAATGTCATCTAAAAAACAATCATCTCTTTCCATTGTGTGAAACACTGTCCAGAATTGGAGTAGATCCAATTAAATGTTTTAGGACTGAATATTGAGCTGATAAGTCAACACCAACTTTTTGAAGGCACTAGCAGATTTGTTAAACAACAGGTTTTATATTTTGACTAGTTTATGTCCCAGGAACAGTTAGTACAGAACAGGTCAATGCAACCCGATTGTGGTAAGAGCTATGGAAACAATGGTTAAACCTTGAGAGATGTATTTACCTCTGGGTCTAAAGATCCCTTGTGTATCTGTATGTATTTTAGATTGTACAACCCAGAGTGAAGGGTTTGAAAGGATAACGGGTCTGGTTTTATGTGTTGATTTTGCTTACTTTGATAGAAGTATAGGACATCCTATGATAGTTTAAGCCATAATATAATGCTTACCTTAAAATGAAACAATAATTATCACAGTGGTAAAAGGAGGGTATGTGAGGGAAAATGTTGTCTAAAGAGATGTGAACTCGTGAACCAATTGGAACATCTCAGTTTTAGTATTTGAGAGTAGaagcctattttttttttaacaatttacttaactagggaagtcagttaagaacaaattcttattttcaatgacggcctaggaacagtgagtaaactgccttgttcaggggcagaatgacagatttttatcttgtcagctctgggatttgatctagcaaccttttggttactagttcaatgctctaaccacctgccgccccacatgCAGGAGCAAAGTTAATAATTAATAATGTAAATCATGCTGACATGACTTGTTTGTGTAACATTATATTAGAACTGAAAGGGAATGCCCTTTTCAGAGTTTACATCAAATTTGGATTGAGTTTGTGTACCTCTCTGGCTGTGATAATAAAGATTGATTCATGCACATTGAGTTTGAGTCCATAGTGGTGAATTTCCACGAcagtcataccaaggataatttagctatttgatttagaattttaagccTCCTTAAAGTATCCAAAAATTATATCAACATAttatttgctctgttttttgggggggcctTACTAGCCCATACAAATGCCTTGAAttacagattcactacatggaacaacagatagtcccaaaAAATAAGTTAGTTCTGAAGTGTTTCTCCTATATctgagataaatatatatatttctttacatGTATTTAACACCATACTTTTGGCACTAAACATGTACTGATTTTGCATGTATTTAACCCCATATTTTTGGCATtaaacatgcactgtcaactgtgagacctaaTATAGACAGTTGTGTCTATATtgtcatgtccagtcaattgaatttaccacagatggactccaatcaagttgtcgaaacatctcaaggatgactgggtattgtgtgtagatttatgaggggaagaaataattaaatccattttagaataaggctgtgacgtatcaaaatgtggaaaacaaaaaaagggatctgaatactttctgaatgcactgtatacagtaccacCATTCGTTTTTTTCCAACTGGTACCGGGGGTACTtgagacgagtcttgtgaggcctgtgggcgttcTAGAGCAAAACCACTGACATTTACCTCTGTTTTGCACAGAGGGAttatattagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2340941 True 2157 lncRNA 0.37 1 7429541 7431697

Neighbor

gene id symbol gene type direction distance location
LOC110507440 LOC106612400 coding upstream 220013 7197450 ~ 7209528 (+)
LOC110507439 prkd2 coding upstream 246104 7135522 ~ 7183437 (+)
LOC110507437 strn4 coding upstream 296279 7107965 ~ 7133262 (+)
LOC110507436 slc1a5 coding upstream 328284 7088048 ~ 7101257 (+)
LOC110507056 npas1 coding upstream 454912 6936909 ~ 6974629 (+)
LOC110507445 LOC106612744 coding downstream 66293 7497990 ~ 7502256 (+)
LOC110507446 LOC106612727 coding downstream 84127 7515824 ~ 7531443 (+)
LOC110507452 LOC106580723 coding downstream 788147 8219844 ~ 8222436 (+)
LOC110507457 bl1s3 coding downstream 855751 8287448 ~ 8292186 (+)
si:cabz01090165.1 LOC106580728 coding downstream 1174853 8606550 ~ 8741534 (+)
G2046464 NA non-coding upstream 7316 7422012 ~ 7422225 (+)
G2046463 NA non-coding upstream 7629 7421622 ~ 7421912 (+)
G2046345 NA non-coding upstream 177966 7245806 ~ 7251575 (+)
G2046332 NA non-coding upstream 332512 7096823 ~ 7097029 (+)
G2046472 NA non-coding downstream 353 7432050 ~ 7432444 (+)
G2046473 NA non-coding downstream 1098 7432795 ~ 7433133 (+)
G2046474 NA non-coding downstream 2279 7433976 ~ 7435522 (+)
G2046526 NA non-coding downstream 80870 7512567 ~ 7512779 (+)
G2046575 NA non-coding downstream 174338 7606035 ~ 7606235 (+)
G2046384 LOC106612398 other upstream 171311 7256631 ~ 7258230 (+)
G2045665 NA other upstream 708849 6719764 ~ 6720692 (+)
G2045655 NA other upstream 736497 6692544 ~ 6693044 (+)
G2045522 NA other upstream 934407 6494833 ~ 6495134 (+)
G2049339 LOC100380674 other downstream 1975928 9407625 ~ 9408571 (+)
G2049657 NA other downstream 2356109 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 2847413 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 2957304 10384807 ~ 10390951 (+)

Expression


Co-expression Network