G2046473


Basic Information

Item Value
gene id G2046473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 7432795 ~ 7433133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2340943
gtcttgcagtattacttactGGCCTTGTTGAAAACAGAATGGATGATTTGTTGAacacaagcttccttcttttctctTTGTCATACAGAACAGTAATTTGGAAGGAAAGCAATGCTGTTCctctgtattttcaagtattgtggtggcagcatcatgttatgggtatgattgtcATCGACAGAACCAATGAACCAAGCTGCAAGGAAAAGGATACAGGCAGGGTGCTCCGCATCCTACTCCAACTAGGCCTATTGACATGGAGTATGTTGCATTTCCTATTTGTCAGTTTGAATGAAATGAGTGAGTCCTGCCCTGATGACTGTATTAGGTTTACAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2340943 True 339 lncRNA 0.41 1 7432795 7433133

Neighbor

gene id symbol gene type direction distance location
LOC110507440 LOC106612400 coding upstream 223267 7197450 ~ 7209528 (+)
LOC110507439 prkd2 coding upstream 249358 7135522 ~ 7183437 (+)
LOC110507437 strn4 coding upstream 299533 7107965 ~ 7133262 (+)
LOC110507436 slc1a5 coding upstream 331538 7088048 ~ 7101257 (+)
LOC110507056 npas1 coding upstream 458166 6936909 ~ 6974629 (+)
LOC110507445 LOC106612744 coding downstream 64857 7497990 ~ 7502256 (+)
LOC110507446 LOC106612727 coding downstream 82691 7515824 ~ 7531443 (+)
LOC110507452 LOC106580723 coding downstream 786711 8219844 ~ 8222436 (+)
LOC110507457 bl1s3 coding downstream 854315 8287448 ~ 8292186 (+)
si:cabz01090165.1 LOC106580728 coding downstream 1173417 8606550 ~ 8741534 (+)
G2046472 NA non-coding upstream 351 7432050 ~ 7432444 (+)
G2046471 NA non-coding upstream 1098 7429541 ~ 7431697 (+)
G2046464 NA non-coding upstream 10570 7422012 ~ 7422225 (+)
G2046463 NA non-coding upstream 10883 7421622 ~ 7421912 (+)
G2046345 NA non-coding upstream 181220 7245806 ~ 7251575 (+)
G2046474 NA non-coding downstream 843 7433976 ~ 7435522 (+)
G2046526 NA non-coding downstream 79434 7512567 ~ 7512779 (+)
G2046575 NA non-coding downstream 172902 7606035 ~ 7606235 (+)
G2046579 NA non-coding downstream 178225 7611358 ~ 7611567 (+)
G2046592 NA non-coding downstream 194103 7627236 ~ 7627632 (+)
G2046384 LOC106612398 other upstream 174565 7256631 ~ 7258230 (+)
G2045665 NA other upstream 712103 6719764 ~ 6720692 (+)
G2045655 NA other upstream 739751 6692544 ~ 6693044 (+)
G2045522 NA other upstream 937661 6494833 ~ 6495134 (+)
G2049339 LOC100380674 other downstream 1974492 9407625 ~ 9408571 (+)
G2049657 NA other downstream 2354673 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 2845977 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 2955868 10384807 ~ 10390951 (+)

Expression


Co-expression Network